Геном прокариот/Материалы:NC 003912

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_003912            1777831 bp    DNA     circular BCT 20-JUN-2007
   DEFINITION  Campylobacter jejuni RM1221, complete genome.
   ACCESSION   NC_003912
   VERSION     NC_003912.7  GI:57236892
   KEYWORDS    .
   SOURCE      Campylobacter jejuni RM1221
     ORGANISM  Campylobacter jejuni RM1221
               Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;
               Campylobacteraceae; Campylobacter.
   REFERENCE   1  (bases 1 to 1777831)
     AUTHORS   Fouts,D.E., Mongodin,E.F., Mandrell,R.E., Miller,W.G., Rasko,D.A.,
               Ravel,J., Brinkac,L.M., DeBoy,R.T., Parker,C.T., Daugherty,S.C.,
               Dodson,R.J., Durkin,A.S., Madupu,R., Sullivan,S.A., Shetty,J.U.,
               Ayodeji,M.A., Shvartsbeyn,A., Schatz,M.C., Badger,J.H., Fraser,C.M.
               and Nelson,K.E.
     TITLE     Major structural differences and novel potential virulence
               mechanisms from the genomes of multiple campylobacter species
     JOURNAL   PLoS Biol. 3 (1), E15 (2005)
      PUBMED   15660156
   REFERENCE   2  (bases 1 to 1777831)
     AUTHORS   Fouts,D.E., Mongodin,E.F., Mandrell,R.E., Miller,W.G., Rasko,D.A.,
               Ravel,J., Brinkac,L.M., DeBoy,R.T., Parker,C.T., Daugherty,S.C.,
               Dodson,R.J., Durkin,A.S., Madupu,R., Sullivan,S.A., Shetty,J.U.,
               Ayodeji,M.A., Shvartsbeyn,A., Fraser,C.M. and Nelson,K.E.
     TITLE     Direct Submission
     JOURNAL   Submitted (23-SEP-2004) The Institute for Genomic Research, 9712
               Medical Center Dr, Rockville, MD 20850, USA
   REFERENCE   3  (bases 1 to 1777831)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (06-JUN-2002) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000025.
               On Jan 7, 2005 this sequence version replaced gi:50659164.
               COMPLETENESS: full length.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
37396	38908	+	1513	57236892	CJE_Cj16SA	-	16S ribosomal RNA
39013	39088	+	76	57236892	CJE_tRNA-Ala-1	-	^{02 Ala tRNA}
39097	39173	+	77	57236892	CJE_tRNA-Ile-1	-	^{14 Ile tRNA}
39710	42772	+	3063	57236892	CJE_Cj23SA	-	23S ribosomal RNA
43017	43136	+	120	57236892	CJE_r01	-	5S ribosomal RNA
65632	65732	+	101	57236892	CJE_CjSRP1	-	sRNA
164490	164564	+	75	57236892	CJE_tRNA-Glu-1	-	^{04 Glu tRNA}
432211	433723	+	1513	57236892	CJE_Cj16SB	-	16S ribosomal RNA
433828	433903	+	76	57236892	CJE_tRNA-Ala-2	-	^{02 Ala tRNA}
433912	433988	+	77	57236892	CJE_tRNA-Ile-2	-	^{14 Ile tRNA}
434525	437587	+	3063	57236892	CJE_Cj23SB	-	23S ribosomal RNA
437832	437951	+	120	57236892	CJE_r02	-	5S ribosomal RNA
472026	472101	+	76	57236892	CJE_tRNA-Thr-1	-	^{12 Thr tRNA}
472152	472237	+	86	57236892	CJE_tRNA-Tyr-1	-	^{18 Tyr tRNA}
472244	472320	+	77	57236892	CJE_tRNA-Gly-1	-	^{01 Gly tRNA}
472422	472496	+	75	57236892	CJE_tRNA-Thr-2	-	^{12 Thr tRNA}
473988	474063	+	76	57236892	CJE_tRNA-Trp-1	-	^{20 Trp tRNA}
498441	498517	+	77	57236892	CJE_tRNA-Arg-1	-	^{11 Arg tRNA}
591554	591871	-	318	57236892	CJE_CjrnpB1	-	sRNA
609439	609514	-	76	57236892	CJE_tRNA-Met-1	-	^{16 Met tRNA}
609549	609623	-	75	57236892	CJE_tRNA-Gln-1	-	^{05 Gln tRNA}
775170	776682	+	1513	57236892	CJE_Cj16SC	-	16S ribosomal RNA
776787	776862	+	76	57236892	CJE_tRNA-Ala-3	-	^{02 Ala tRNA}
776871	776947	+	77	57236892	CJE_tRNA-Ile-3	-	^{14 Ile tRNA}
777484	780546	+	3063	57236892	CJE_Cj23SC	-	23S ribosomal RNA
780791	780910	+	120	57236892	CJE_r03	-	5S ribosomal RNA
904254	904340	+	87	57236892	CJE_tRNA-Leu-1	-	^{15 Leu tRNA}
904351	904425	+	75	57236892	CJE_tRNA-Gly-2	-	^{01 Gly tRNA}
951076	951161	+	86	57236892	CJE_tRNA-Leu-2	-	^{15 Leu tRNA}
956281	956357	-	77	57236892	CJE_tRNA-Asp-1	-	^{06 Asp tRNA}
956409	956484	-	76	57236892	CJE_tRNA-Val-1	-	^{13 Val tRNA}
956491	956566	-	76	57236892	CJE_tRNA-Arg-2	-	^{11 Arg tRNA}
956586	956661	-	76	57236892	CJE_tRNA-Lys-1	-	^{10 Lys tRNA}
956666	956742	-	77	57236892	CJE_tRNA-Asp-2	-	^{06 Asp tRNA}
956794	956869	-	76	57236892	CJE_tRNA-Val-2	-	^{13 Val tRNA}
956877	956952	-	76	57236892	CJE_tRNA-Lys-2	-	^{10 Lys tRNA}
1021022	1021098	+	77	57236892	CJE_tRNA-Arg-3	-	^{11 Arg tRNA}
1274878	1274952	-	75	57236892	CJE_tRNA-Asn-1	-	^{07 Asn tRNA}
1335641	1335717	+	77	57236892	CJE_tRNA-Met-2	-	^{16 Met tRNA}
1372046	1372121	-	76	57236892	CJE_tRNA-Phe-1	-	^{17 Phe tRNA}
1440461	1440550	-	90	57236892	CJE_tRNA-Ser-1	-	^{08 Ser tRNA}
1448564	1448922	-	359	57236892	CJE_CjtmRNA1	-	sRNA
1570935	1571032	-	98	57236892	CJE_tRNA-SeC-1	-	Sec tRNA
1690832	1690906	+	75	57236892	CJE_tRNA-Gly-3	-	^{01 Gly tRNA}
1690916	1691004	+	89	57236892	CJE_tRNA-Leu-3	-	^{15 Leu tRNA}
1691023	1691096	+	74	57236892	CJE_tRNA-Cys-1	-	^{19 Cys tRNA}
1691118	1691205	+	88	57236892	CJE_tRNA-Ser-2	-	^{08 Ser tRNA}
1731606	1731690	-	85	57236892	CJE_tRNA-Leu-4	-	^{15 Leu tRNA}
1731696	1731772	-	77	57236892	CJE_tRNA-Arg-4	-	^{11 Arg tRNA}
1731787	1731863	-	77	57236892	CJE_tRNA-Arg-5	-	^{11 Arg tRNA}
1731868	1731944	-	77	57236892	CJE_tRNA-His-1	-	^{09 His tRNA}
1731969	1732046	-	78	57236892	CJE_tRNA-Pro-1	-	^{03 Pro tRNA}
1762126	1762202	-	77	57236892	CJE_tRNA-Met-3	-	^{16 Met tRNA}
1762338	1762425	+	88	57236892	CJE_tRNA-Ser-3	-	^{08 Ser tRNA}
1763635	1763710	+	76	57236892	CJE_tRNA-Ala-4	-	^{02 Ala tRNA}
1763714	1763789	+	76	57236892	CJE_tRNA-Val-3	-	^{13 Val tRNA}