Геном прокариот/Материалы:NC 006513

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_006513            4296230 bp    DNA     circular BCT 26-JAN-2007
   DEFINITION  Azoarcus sp. EbN1, complete genome.
   ACCESSION   NC_006513
   VERSION     NC_006513.1  GI:56475432
   KEYWORDS    complete genome.
   SOURCE      Azoarcus sp. EbN1
     ORGANISM  Azoarcus sp. EbN1
               Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales;
               Rhodocyclaceae; Azoarcus.
   REFERENCE   1  (bases 1 to 4296230)
     AUTHORS   Kuhner,S., Wohlbrand,L., Fritz,I., Wruck,W., Hultschig,C.,
               Hufnagel,P., Kube,M., Reinhardt,R. and Rabus,R.
     TITLE     Substrate-dependent regulation of anaerobic degradation pathways
               for toluene and ethylbenzene in a denitrifying bacterium, strain
               EbN1
     JOURNAL   J. Bacteriol. 187 (4), 1493-1503 (2005)
      PUBMED   15687214
   REFERENCE   2  (bases 1 to 4296230)
     AUTHORS   Rabus,R., Kube,M., Heider,J., Beck,A., Heitmann,K., Widdel,F. and
               Reinhardt,R.
     TITLE     The genome sequence of an anaerobic aromatic-degrading denitrifying
               bacterium, strain EbN1
     JOURNAL   Arch. Microbiol. 183 (1), 27-36 (2005)
      PUBMED   15551059
   REFERENCE   3  (bases 1093534 to 1129866)
     AUTHORS   Kube,M., Heider,J., Amann,J., Hufnagel,P., Kuhner,S., Beck,A.,
               Reinhardt,R. and Rabus,R.
     TITLE     Genes involved in the anaerobic degradation of toluene in a
               denitrifying bacterium, strain EbN1
     JOURNAL   Arch. Microbiol. 181 (3), 182-194 (2004)
      PUBMED   14735297
   REFERENCE   4  (bases 1365097 to 1421297)
     AUTHORS   Rabus,R., Kube,M., Beck,A., Widdel,F. and Reinhardt,R.
     TITLE     Genes involved in the anaerobic degradation of ethylbenzene in a
               denitrifying bacterium, strain EbN1
     JOURNAL   Arch. Microbiol. 178 (6), 506-516 (2002)
      PUBMED   12420173
   REFERENCE   5  (bases 1 to 4296230)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (08-DEC-2004) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   6  (bases 1 to 4296230)
     AUTHORS   PROSCIENCE.
     TITLE     Direct Submission
     JOURNAL   Submitted (16-NOV-2004) Max Planck Institut Fuer Molekulare
               Genetik, proScience Ihnestrasse 73, Berlin 14195, Germany
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CR555306.
               COMPLETENESS: full length.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
13221	13295	+	75	56475432	ebt01	-	^{11 Arg tRNA}
55614	55689	-	76	56475432	ebt02	-	^{02 Ala tRNA}
119914	119989	+	76	56475432	ebt03	-	^{12 Thr tRNA}
139763	139839	+	77	56475432	ebt04	-	^{16 Met tRNA}
339929	340005	-	77	56475432	ebt05	-	^{11 Arg tRNA}
372172	372265	-	94	56475432	ebt06	-	^{08 Ser tRNA}
440671	440758	-	88	56475432	ebt07	-	^{08 Ser tRNA}
469495	469570	-	76	56475432	ebt08	-	^{12 Thr tRNA}
504122	504198	-	77	56475432	ebt09	-	^{03 Pro tRNA}
511744	511820	-	77	56475432	ebt10	-	^{13 Val tRNA}
545289	545404	-	116	56475432	ebr01	-	5S ribosomal RNA
545499	548384	-	2886	56475432	ebr02	-	23S ribosomal RNA
548660	548735	-	76	56475432	ebt11	-	^{02 Ala tRNA}
548747	548823	-	77	56475432	ebt12	-	^{14 Ile tRNA}
548899	550423	-	1525	56475432	ebr03	-	16S ribosomal RNA
689453	689528	-	76	56475432	ebt13	-	^{17 Phe tRNA}
735160	735244	+	85	56475432	ebt14	-	^{15 Leu tRNA}
735370	735454	+	85	56475432	ebt15	-	^{15 Leu tRNA}
792356	792432	+	77	56475432	ebt16	-	^{16 Met tRNA}
826265	826341	+	77	56475432	ebt17	-	^{05 Gln tRNA}
828827	828913	-	87	56475432	ebt18	-	^{15 Leu tRNA}
1383723	1383796	+	74	56475432	ebt19	-	^{01 Gly tRNA}
1583229	1583304	+	76	56475432	ebt20	-	^{10 Lys tRNA}
1583319	1583394	+	76	56475432	ebt21	-	^{10 Lys tRNA}
1599533	1599600	+	68	56475432	ebt22	-	Xaa tRNA
1833251	1833327	+	77	56475432	ebt23	-	^{11 Arg tRNA}
1845882	1847406	+	1525	56475432	ebr04	-	16S ribosomal RNA
1847482	1847558	+	77	56475432	ebt24	-	^{14 Ile tRNA}
1847570	1847645	+	76	56475432	ebt25	-	^{02 Ala tRNA}
1847921	1850806	+	2886	56475432	ebr05	-	23S ribosomal RNA
1850901	1851016	+	116	56475432	ebr06	-	5S ribosomal RNA
2242628	2242712	+	85	56475432	ebt26	-	^{18 Tyr tRNA}
2242786	2242859	+	74	56475432	ebt27	-	^{01 Gly tRNA}
2242886	2242960	+	75	56475432	ebt28	-	^{12 Thr tRNA}
2244297	2244372	+	76	56475432	ebt29	-	^{20 Trp tRNA}
2411732	2413256	+	1525	56475432	ebr07	-	16S ribosomal RNA
2413332	2413408	+	77	56475432	ebt30	-	^{14 Ile tRNA}
2413420	2413495	+	76	56475432	ebt31	-	^{02 Ala tRNA}
2413771	2416656	+	2886	56475432	ebr08	-	23S ribosomal RNA
2416751	2416866	+	116	56475432	ebr09	-	5S ribosomal RNA
2581821	2581896	-	76	56475432	ebt32	-	^{14 Ile tRNA}
2621003	2622527	+	1525	56475432	ebr10	-	16S ribosomal RNA
2622603	2622679	+	77	56475432	ebt33	-	^{14 Ile tRNA}
2622691	2622766	+	76	56475432	ebt34	-	^{02 Ala tRNA}
2623042	2625927	+	2886	56475432	ebr11	-	23S ribosomal RNA
2626022	2626137	+	116	56475432	ebr12	-	5S ribosomal RNA
2677689	2677765	+	77	56475432	ebt35	-	^{03 Pro tRNA}
2694921	2695011	-	91	56475432	ebt36	-	^{08 Ser tRNA}
2803127	2803202	+	76	56475432	ebt37	-	^{02 Ala tRNA}
2803221	2803296	+	76	56475432	ebt38	-	^{04 Glu tRNA}
2803363	2803439	+	77	56475432	ebt39	-	^{06 Asp tRNA}
2803552	2803627	+	76	56475432	ebt40	-	^{02 Ala tRNA}
2803646	2803721	+	76	56475432	ebt41	-	^{04 Glu tRNA}
2803788	2803864	+	77	56475432	ebt42	-	^{06 Asp tRNA}
2866309	2866393	+	85	56475432	ebt43	-	^{15 Leu tRNA}
2959537	2959612	+	76	56475432	ebt44	-	^{13 Val tRNA}
3240316	3240391	-	76	56475432	ebt45	-	^{07 Asn tRNA}
3240431	3240506	-	76	56475432	ebt46	-	^{07 Asn tRNA}
3304938	3305013	+	76	56475432	ebt47	-	^{01 Gly tRNA}
3305084	3305157	+	74	56475432	ebt48	-	^{19 Cys tRNA}
3380747	3380816	+	70	56475432	ebt49	-	Xaa tRNA
3400810	3400885	+	76	56475432	ebt50	-	^{01 Gly tRNA}
3402661	3402745	-	85	56475432	ebt51	-	^{15 Leu tRNA}
3482256	3482332	+	77	56475432	ebt52	-	^{03 Pro tRNA}
3482360	3482436	+	77	56475432	ebt53	-	^{11 Arg tRNA}
3482477	3482552	+	76	56475432	ebt54	-	^{09 His tRNA}
4035763	4035847	-	85	56475432	ebt55	-	^{15 Leu tRNA}
4068776	4068850	-	75	56475432	ebt56	-	^{13 Val tRNA}
4068879	4068953	-	75	56475432	ebt57	-	^{13 Val tRNA}
4155688	4155777	-	90	56475432	ebt58	-	^{08 Ser tRNA}