Геном прокариот/Материалы:NC 007482
(перенаправлено с «Материалы:NC 007482»)
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Базовый уровень статей |
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LOCUS NC_007482 635328 bp DNA circular BCT 18-JAN-2006
DEFINITION Pseudoalteromonas haloplanktis TAC125 chromosome II, complete
sequence.
ACCESSION NC_007482
VERSION NC_007482.1 GI:77361923
KEYWORDS .
SOURCE Pseudoalteromonas haloplanktis TAC125
ORGANISM Pseudoalteromonas haloplanktis TAC125
Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
Pseudoalteromonadaceae; Pseudoalteromonas.
REFERENCE 1 (bases 1 to 635328)
AUTHORS Medigue,C., Krin,E., Pascal,G., Barbe,V., Bernsel,A., Bertin,P.N.,
Cheung,F., Cruveiller,S., D'Amico,S., Duilio,A., Fang,G.,
Feller,G., Ho,C., Mangenot,S., Marino,G., Nilsson,J., Parrilli,E.,
Rocha,E.P., Rouy,Z., Sekowska,A., Tutino,M.L., Vallenet,D., von
Heijne,G. and Danchin,A.
TITLE Coping with cold: The genome of the versatile marine Antarctica
bacterium Pseudoalteromonas haloplanktis TAC125
JOURNAL (er) Genome Res. 15 (10), 1325-1335 (2005) In press
PUBMED 16169927
REMARK 1. Genoscope, CNRS-UMR 8030, Atelier de Genomique Comparative, 2,
rue Gaston Cremieux, 91006 Evry Cedex, France 2. Genetics of
Bacterial Genomes, Institut Pasteur, 28 rue du Docteur Roux, 75724
Paris Cedex 15, France 3. Dept of Biochemistry & Biophysics,
Stockholm University, S-106 91 Stockholm, Sweden 4. Dynamique,
Evolution et Expression de Genomes de Micro-organismes, Universite
Louis Pasteur, 28, rue Goethe, 67000 Strasbourg, France 5.
Laboratoire de Biochimie, Institut de Chimie B6, Universite de
Liege, B-4000 Liege-Sart Tilman, Belgium 6. Dipartimento di Chimica
Organica e Biochimica, edificio MB, via Cinthia, Complesso
Universitario Monte S. Angelo, 80126 Napoli, Italy 7. CEA Saclay,
Laboratoire Stress Oxydants et Cancer, DSV/DBJC/SBMS, Bat 142,
91191 Gif sur Yvette Cedex, France
REFERENCE 2 (bases 1 to 635328)
AUTHORS .
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (06-OCT-2005) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 635328)
AUTHORS Genoscope.
CONSRTM Institut Pasteur and Genoscope
TITLE Direct Submission
JOURNAL Submitted (26-APR-2005) Genoscope, Centre National de Sequencage,
BP 191, Evry cedex 91006, France
REMARK This sequence was made in collaboration between the laboratory
Institut Pasteur (France) and Genoscope (France).
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CR954247.
Annotation data relative to COG assignations, enzymatic function
prediction (PRIAM software), TMHMM and SignalP predictions, and
synteny results (Syntonizer software) are available in Psychroscope
database via MaGe annotation system
http://www.genoscope.cns.fr/agc/mage/psychroscope. Each annotation
includes a confidence level as follow: 1 : Function experimentally
demonstrated in the studied organism 2a : Function of homologous
gene experimentally demonstrated in an other organism
2b : Function of strongly homologous gene
3 : Function proposed based on presence of conserved amino acid
motif, structural feature or limited homology
4 : Homologs of previously reported genes of unknown function 5 :
No homology to any previously reported sequences 6 : Doubtful CDS
7 : Gene remnant.
COMPLETENESS: full length.