Геном прокариот/Материалы:NC 007508

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_007508            5178466 bp    DNA     circular BCT 21-APR-2006
   DEFINITION  Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome.
   ACCESSION   NC_007508
   VERSION     NC_007508.1  GI:78045556
   KEYWORDS    complete genome.
   SOURCE      Xanthomonas campestris pv. vesicatoria str. 85-10
     ORGANISM  Xanthomonas campestris pv. vesicatoria str. 85-10
               Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
               Xanthomonadaceae; Xanthomonas.
   REFERENCE   1
     AUTHORS   Thieme,F., Koebnik,R., Bekel,T., Berger,C., Boch,J., Buttner,D.,
               Caldana,C., Gaigalat,L., Goesmann,A., Kay,S., Kirchner,O., Lanz,C.,
               Linke,B., McHardy,A.C., Meyer,F., Mittenhuber,G., Nies,D.H.,
               Niesbach-Klosgen,U., Patschkowski,T., Ruckert,C., Rupp,O.,
               Schneiker,S., Schuster,S.C., Vorholter,F.J., Weber,E., Puhler,A.,
               Bonas,U., Bartels,D. and Kaiser,O.
     TITLE     Insights into Genome Plasticity and Pathogenicity of the Plant
               Pathogenic Bacterium Xanthomonas campestris pv. vesicatoria
               Revealed by the Complete Genome Sequence
     JOURNAL   J. Bacteriol. 187 (21), 7254-7266 (2005)
      PUBMED   16237009
   REFERENCE   2  (bases 1 to 5178466)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (23-OCT-2005) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 5178466)
     AUTHORS   Thieme,F.
     TITLE     Direct Submission
     JOURNAL   Submitted (16-JUN-2005) Thieme F., Institut fuer genetik,
               Martin-Luther-Universitaet, Weinbergweg 10, 06120 Halle/Saale,
               GERMANY
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AM039952.
               COMPLETENESS: full length.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
459479	459555	+	77	78045556	XCV_tRNA01	-	^{11 Arg tRNA}
590658	590732	-	75	78045556	XCV_tRNA02	-	^{05 Gln tRNA}
590785	590861	-	77	78045556	XCV_tRNA03	-	^{16 Met tRNA}
1110651	1110727	+	77	78045556	XCV_tRNA04	-	^{05 Gln tRNA}
1114553	1114638	+	86	78045556	XCV_tRNA05	-	^{18 Tyr tRNA}
1114668	1114741	+	74	78045556	XCV_tRNA06	-	^{01 Gly tRNA}
1114775	1114850	+	76	78045556	XCV_tRNA07	-	^{12 Thr tRNA}
1116194	1116269	+	76	78045556	XCV_tRNA08	-	^{20 Trp tRNA}
1209693	1209769	+	77	78045556	XCV_tRNA09	-	^{03 Pro tRNA}
1209812	1209888	+	77	78045556	XCV_tRNA10	-	^{11 Arg tRNA}
1209921	1209997	+	77	78045556	XCV_tRNA11	-	^{09 His tRNA}
1210091	1210166	+	76	78045556	XCV_tRNA12	-	^{10 Lys tRNA}
1212077	1212161	+	85	78045556	XCV_tRNA13	-	^{15 Leu tRNA}
1218900	1218974	+	75	78045556	XCV_tRNA14	-	^{13 Val tRNA}
1219003	1219079	+	77	78045556	XCV_tRNA15	-	^{06 Asp tRNA}
1219174	1219250	+	77	78045556	XCV_tRNA16	-	^{06 Asp tRNA}
1226939	1227029	+	91	78045556	XCV_tRNA17	-	^{08 Ser tRNA}
1257334	1257426	-	93	78045556	XCV_tRNA18	-	^{08 Ser tRNA}
1281512	1281586	+	75	78045556	XCV_tRNA19	-	^{13 Val tRNA}
1451062	1451137	+	76	78045556	XCV_tRNA20	-	^{12 Thr tRNA}
1696549	1696635	-	87	78045556	XCV_tRNA21	-	^{15 Leu tRNA}
1816529	1816615	-	87	78045556	XCV_tRNA22	-	^{15 Leu tRNA}
1912626	1912715	+	90	78045556	XCV_tRNA23	-	^{08 Ser tRNA}
1999469	1999561	+	93	78045556	XCV_tRNA24	-	^{08 Ser tRNA}
2006051	2006127	-	77	78045556	XCV_tRNA25	-	^{11 Arg tRNA}
2006229	2006305	-	77	78045556	XCV_tRNA26	-	^{11 Arg tRNA}
2046796	2046870	-	75	78045556	XCV_tRNA27	-	^{04 Glu tRNA}
2084889	2084965	+	77	78045556	XCV_tRNA28	-	^{11 Arg tRNA}
2549134	2549220	+	87	78045556	XCV_tRNA29	-	^{15 Leu tRNA}
2554421	2554496	-	76	78045556	XCV_tRNA30	-	^{04 Glu tRNA}
2554544	2554619	-	76	78045556	XCV_tRNA31	-	^{02 Ala tRNA}
2555369	2555444	-	76	78045556	XCV_tRNA32	-	^{04 Glu tRNA}
2555492	2555567	-	76	78045556	XCV_tRNA33	-	^{02 Ala tRNA}
2593428	2593503	+	76	78045556	XCV_tRNA34	-	^{01 Gly tRNA}
2631492	2631565	+	74	78045556	XCV_tRNA35	-	^{19 Cys tRNA}
2631647	2631722	+	76	78045556	XCV_tRNA36	-	^{01 Gly tRNA}
2741313	2741396	-	84	78045556	XCV_tRNA37	-	^{15 Leu tRNA}
2862478	2862554	+	77	78045556	XCV_tRNA38	-	^{03 Pro tRNA}
2949185	2949260	+	76	78045556	XCV_tRNA39	-	^{02 Ala tRNA}
3138724	3138799	-	76	78045556	XCV_tRNA40	-	^{17 Phe tRNA}
3168625	3168701	-	77	78045556	XCV_tRNA41	-	^{03 Pro tRNA}
3198684	3198758	-	75	78045556	XCV_tRNA42	-	^{13 Val tRNA}
3201608	3201684	-	77	78045556	XCV_tRNA43	-	^{07 Asn tRNA}
3231566	3231642	-	77	78045556	XCV_tRNA44	-	^{16 Met tRNA}
3246769	3246853	-	85	78045556	XCV_tRNA45	-	^{15 Leu tRNA}
3736101	3736176	+	76	78045556	XCV_tRNA46	-	^{10 Lys tRNA}
3901274	3901347	-	74	78045556	XCV_tRNA47	-	^{01 Gly tRNA}
4490035	4490110	-	76	78045556	XCV_tRNA48	-	^{16 Met tRNA}
4601192	4604089	-	2898	78045556	XCVr1	-	23S ribosomal RNA
4604296	4604372	-	77	78045556	XCV_tRNA49	-	^{14 Ile tRNA}
4604391	4604466	-	76	78045556	XCV_tRNA50	-	^{02 Ala tRNA}
4604562	4606106	-	1545	78045556	XCVr2	-	16S ribosomal RNA
4656542	4656615	+	74	78045556	XCV_tRNA51	-	^{12 Thr tRNA}
4703269	4703344	-	76	78045556	XCV_tRNA52	-	^{12 Thr tRNA}
5055371	5058268	-	2898	78045556	XCVr3	-	23S ribosomal RNA
5058475	5058551	-	77	78045556	XCV_tRNA53	-	^{14 Ile tRNA}
5058570	5058645	-	76	78045556	XCV_tRNA54	-	^{02 Ala tRNA}
5058741	5060285	-	1545	78045556	XCVr4	-	16S ribosomal RNA