Геном прокариот/Материалы:NC 007793
(перенаправлено с «Материалы:NC 007793»)
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Базовый уровень статей |
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LOCUS NC_007793 2872769 bp DNA circular BCT 26-JAN-2007
DEFINITION Staphylococcus aureus subsp. aureus USA300, complete genome.
ACCESSION NC_007793
VERSION NC_007793.1 GI:87159884
KEYWORDS .
SOURCE Staphylococcus aureus subsp. aureus USA300
ORGANISM Staphylococcus aureus subsp. aureus USA300
Bacteria; Firmicutes; Bacillales; Staphylococcus.
REFERENCE 1 (bases 1 to 2872769)
AUTHORS Diep,B.A., Gill,S.R., Chang,R.F., Phan,T.H., Chen,J.H.,
Davidson,M.G., Lin,F., Lin,J., Carleton,H.A., Mongodin,E.F.,
Sensabaugh,G.F. and Perdreau-Remington,F.
TITLE Complete genome sequence of USA300, an epidemic clone of
community-acquired meticillin-resistant Staphylococcus aureus
JOURNAL Lancet 367 (9512), 731-739 (2006)
PUBMED 16517273
REFERENCE 2 (bases 1 to 2872769)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (11-FEB-2006) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 2872769)
AUTHORS Diep,B.A., Gill,S.R., Chang,R.F., Phan,T.H., Chen,J.H.,
Davidson,M.G., Lin,F., Lin,J., Carleton,H.A., Mongodin,E.F.,
Sensabaugh,G.F. and Perdreau-Remington,F.
TITLE Direct Submission
JOURNAL Submitted (30-JAN-2006) Department of Medicine, University of
California, San Francisco, San Francisco, CA 94143, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from CP000255.
COMPLETENESS: full length.
Расположение РНК
[править]| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 24178 | 24252 | + | 75 | 87159884 | SAUSA300_0018 | - | 04 Glu tRNA |
| 24260 | 24332 | + | 73 | 87159884 | SAUSA300_0019 | - | 06 Asp tRNA |
| 503651 | 503743 | + | 93 | 87159884 | SAUSA300_0447 | - | 08 Ser tRNA |
| 512890 | 514444 | + | 1555 | 87159884 | SAUSA300_0455 | - | 16S ribosomal RNA |
| 514809 | 517731 | + | 2923 | 87159884 | SAUSA300_0456 | - | 23S ribosomal RNA |
| 517804 | 517918 | + | 115 | 87159884 | SAUSA300_0457 | - | 5S ribosomal RNA |
| 556197 | 556311 | + | 115 | 87159884 | SAUSA300_0497 | - | 5S ribosomal RNA |
| 556324 | 556399 | + | 76 | 87159884 | SAUSA300_0498 | - | 02 Ala tRNA |
| 556521 | 558075 | + | 1555 | 87159884 | SAUSA300_0499 | - | 16S ribosomal RNA |
| 558168 | 558244 | + | 77 | 87159884 | SAUSA300_0500 | - | 14 Ile tRNA |
| 558412 | 561334 | + | 2923 | 87159884 | SAUSA300_0501 | - | 23S ribosomal RNA |
| 561407 | 561521 | + | 115 | 87159884 | SAUSA300_0502 | - | 5S ribosomal RNA |
| 838318 | 838389 | - | 72 | 87159884 | SAUSA300_0751 | - | 11 Arg tRNA |
| 854460 | 854818 | + | 359 | 87159884 | SAUSA300_0766 | - | 10Sa RNA (tmRNA) |
| 1018760 | 1018848 | - | 89 | 87159884 | SAUSA300_0926 | - | 08 Ser tRNA |
| 1018851 | 1018925 | - | 75 | 87159884 | SAUSA300_0927 | - | 07 Asn tRNA |
| 1167961 | 1168034 | - | 74 | 87159884 | SAUSA300_1066 | - | 11 Arg tRNA |
| 1960620 | 1960708 | - | 89 | 87159884 | SAUSA300_1772 | - | 08 Ser tRNA |
| 1960763 | 1960834 | - | 72 | 87159884 | SAUSA300_1773 | - | 04 Glu tRNA |
| 1960836 | 1960910 | - | 75 | 87159884 | SAUSA300_1774 | - | 07 Asn tRNA |
| 1960925 | 1960998 | - | 74 | 87159884 | SAUSA300_1775 | - | 01 Gly tRNA |
| 1961014 | 1961089 | - | 76 | 87159884 | SAUSA300_1776 | - | 09 His tRNA |
| 1961103 | 1961175 | - | 73 | 87159884 | SAUSA300_1777 | - | 17 Phe tRNA |
| 1961192 | 1961267 | - | 76 | 87159884 | SAUSA300_1778 | - | 06 Asp tRNA |
| 1961289 | 1961362 | - | 74 | 87159884 | SAUSA300_1779 | - | 16 Met tRNA |
| 1995143 | 1995226 | - | 84 | 87159884 | SAUSA300_1811 | - | 15 Leu tRNA |
| 1995265 | 1995339 | - | 75 | 87159884 | SAUSA300_1812 | - | Xaa tRNA |
| 1995443 | 1995517 | - | 75 | 87159884 | SAUSA300_1813 | - | 01 Gly tRNA |
| 1995525 | 1995598 | - | 74 | 87159884 | SAUSA300_1814 | - | 19 Cys tRNA |
| 1995604 | 1995675 | - | 72 | 87159884 | SAUSA300_1815 | - | 05 Gln tRNA |
| 1995687 | 1995759 | - | 73 | 87159884 | SAUSA300_1816 | - | 09 His tRNA |
| 1995762 | 1995835 | - | 74 | 87159884 | SAUSA300_1817 | - | 20 Trp tRNA |
| 1995851 | 1995931 | - | 81 | 87159884 | SAUSA300_1818 | - | 18 Tyr tRNA |
| 1995937 | 1996012 | - | 76 | 87159884 | SAUSA300_1819 | - | 12 Thr tRNA |
| 1996020 | 1996092 | - | 73 | 87159884 | SAUSA300_1820 | - | 17 Phe tRNA |
| 1996111 | 1996186 | - | 76 | 87159884 | SAUSA300_1821 | - | 06 Asp tRNA |
| 1996196 | 1996269 | - | 74 | 87159884 | SAUSA300_1822 | - | 16 Met tRNA |
| 1996284 | 1996376 | - | 93 | 87159884 | SAUSA300_1823 | - | 08 Ser tRNA |
| 1996415 | 1996490 | - | 76 | 87159884 | SAUSA300_1824 | - | 06 Asp tRNA |
| 1996501 | 1996590 | - | 90 | 87159884 | SAUSA300_1825 | - | 08 Ser tRNA |
| 1996600 | 1996673 | - | 74 | 87159884 | SAUSA300_1826 | - | 16 Met tRNA |
| 1996699 | 1996775 | - | 77 | 87159884 | SAUSA300_1827 | - | 16 Met tRNA |
| 1996797 | 1996872 | - | 76 | 87159884 | SAUSA300_1828 | - | 02 Ala tRNA |
| 1996890 | 1996963 | - | 74 | 87159884 | SAUSA300_1829 | - | 03 Pro tRNA |
| 1996973 | 1997046 | - | 74 | 87159884 | SAUSA300_1830 | - | 11 Arg tRNA |
| 1997065 | 1997153 | - | 89 | 87159884 | SAUSA300_1831 | - | 15 Leu tRNA |
| 1997164 | 1997238 | - | 75 | 87159884 | SAUSA300_1832 | - | 01 Gly tRNA |
| 1997242 | 1997323 | - | 82 | 87159884 | SAUSA300_1833 | - | 15 Leu tRNA |
| 1997327 | 1997402 | - | 76 | 87159884 | SAUSA300_1834 | - | 10 Lys tRNA |
| 1997408 | 1997483 | - | 76 | 87159884 | SAUSA300_1835 | - | 12 Thr tRNA |
| 1997500 | 1997575 | - | 76 | 87159884 | SAUSA300_1836 | - | 13 Val tRNA |
| 1997587 | 1997701 | - | 115 | 87159884 | SAUSA300_1837 | - | 5S ribosomal RNA |
| 1997774 | 2000696 | - | 2923 | 87159884 | SAUSA300_1838 | - | 23S ribosomal RNA |
| 2000910 | 2000985 | - | 76 | 87159884 | SAUSA300_1839 | - | 02 Ala tRNA |
| 2001004 | 2001080 | - | 77 | 87159884 | SAUSA300_1840 | - | 14 Ile tRNA |
| 2001170 | 2002724 | - | 1555 | 87159884 | SAUSA300_1841 | - | 16S ribosomal RNA |
| 2175811 | 2175925 | - | 115 | 87159884 | SAUSA300_2015 | - | 5S ribosomal RNA |
| 2175998 | 2178920 | - | 2923 | 87159884 | SAUSA300_2016 | - | 23S ribosomal RNA |
| 2179467 | 2181021 | - | 1555 | 87159884 | SAUSA300_2017 | - | 16S ribosomal RNA |
| 2181139 | 2181212 | - | 74 | 87159884 | SAUSA300_2018 | - | 01 Gly tRNA |
| 2181232 | 2181317 | - | 86 | 87159884 | SAUSA300_2019 | - | 15 Leu tRNA |
| 2291848 | 2291923 | - | 76 | 87159884 | SAUSA300_2116 | - | 10 Lys tRNA |
| 2291927 | 2292001 | - | 75 | 87159884 | SAUSA300_2117 | - | 05 Gln tRNA |
| 2292011 | 2292094 | - | 84 | 87159884 | SAUSA300_2118 | - | 18 Tyr tRNA |
| 2292124 | 2292199 | - | 76 | 87159884 | SAUSA300_2119 | - | 13 Val tRNA |
| 2292207 | 2292278 | - | 72 | 87159884 | SAUSA300_2120 | - | 04 Glu tRNA |
| 2292280 | 2292354 | - | 75 | 87159884 | SAUSA300_2121 | - | 07 Asn tRNA |
| 2292365 | 2292479 | - | 115 | 87159884 | SAUSA300_2122 | - | 5S ribosomal RNA |
| 2292552 | 2295474 | - | 2923 | 87159884 | SAUSA300_2123 | - | 23S ribosomal RNA |
| 2296021 | 2297575 | - | 1555 | 87159884 | SAUSA300_2124 | - | 16S ribosomal RNA |