Геном прокариот/Материалы:NC 000918
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Базовый уровень статей |
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LOCUS NC_000918 1551335 bp DNA circular BCT 02-DEC-2005
DEFINITION Aquifex aeolicus VF5, complete genome.
ACCESSION NC_000918
VERSION NC_000918.1 GI:15282445
KEYWORDS .
SOURCE Aquifex aeolicus VF5
ORGANISM Aquifex aeolicus VF5
Bacteria; Aquificae; Aquificales; Aquificaceae; Aquifex.
REFERENCE 1 (bases 1 to 1551335)
AUTHORS Deckert,G., Warren,P.V., Gaasterland,T., Young,W.G., Lenox,A.L.,
Graham,D.E., Overbeek,R., Snead,M.A., Keller,M., Aujay,M.,
Huber,R., Feldman,R.A., Short,J.M., Olson,G.J. and Swanson,R.V.
TITLE The complete genome of the hyperthermophilic bacterium Aquifex
aeolicus
JOURNAL Nature 392 (6674), 353-358 (1998)
PUBMED 9537320
REFERENCE 2 (bases 1 to 1551335)
AUTHORS .
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2001) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1551335)
AUTHORS Deckert,G., Warren,P.V., Gaasterland,T., Young,W.G., Lenox,A.L.,
Graham,D.E., Overbeek,R., Snead,M.A., Keller,M., Aujay,M.,
Huber,R., Feldman,R.A., Short,J.M., Olson,G.J. and Swanson,R.V.
TITLE Direct Submission
JOURNAL Submitted (25-JUL-1997) Diversa Corporation, Genomics, San Diego,
CA 92121
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AE000657.
COMPLETENESS: full length.
Расположение РНК
[править]| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 168875 | 168963 | + | 89 | 15282445 | aq_t01 | - | Anticodon: GGA |
| 215844 | 215928 | + | 85 | 15282445 | aq_t02 | - | Anticodon: GAG |
| 217784 | 217855 | + | 72 | 15282445 | aq_t03 | - | Anticodon: GCC |
| 217867 | 217938 | + | 72 | 15282445 | aq_t04 | - | Anticodon: GCA |
| 296990 | 297061 | - | 72 | 15282445 | aq_t05 | - | Anticodon: CCC |
| 383315 | 383386 | - | 72 | 15282445 | aq_t06 | - | Anticodon: CGT |
| 403089 | 403162 | + | 74 | 15282445 | aq_t07 | - | Anticodon: CAT |
| 443927 | 444000 | - | 74 | 15282445 | aq_t08 | - | Anticodon: CCT |
| 450408 | 450480 | - | 73 | 15282445 | aq_t09 | - | Anticodon: GAA |
| 552612 | 552684 | + | 73 | 15282445 | aq_t10 | - | Anticodon: GGG |
| 567770 | 567889 | - | 120 | 15282445 | aq_r01 | - | 5S ribosomal RNA |
| 567929 | 570884 | - | 2956 | 15282445 | aq_r02 | - | 23S ribosomal RNA |
| 570932 | 571004 | - | 73 | 15282445 | aq_t11 | - | Anticodon: TGC |
| 571021 | 571094 | - | 74 | 15282445 | aq_t12 | - | Anticodon: GAT |
| 571199 | 572785 | - | 1587 | 15282445 | aq_r03 | - | 16S ribosomal RNA |
| 601711 | 601801 | - | 91 | 15282445 | aq_t13 | - | Anticodon: TAA |
| 619914 | 619987 | - | 74 | 15282445 | aq_t14 | - | Anticodon: CCG |
| 643595 | 643683 | - | 89 | 15282445 | aq_t15 | - | Anticodon: GCT |
| 727371 | 727465 | + | 95 | 15282445 | aq_t16 | - | Anticodon: TCA |
| 730604 | 730676 | - | 73 | 15282445 | aq_t17 | - | Anticodon: GAC |
| 844146 | 844230 | - | 85 | 15282445 | aq_t18 | - | Anticodon: CAA |
| 861906 | 861978 | - | 73 | 15282445 | aq_t19 | - | Anticodon: CAT |
| 898302 | 898385 | - | 84 | 15282445 | aq_t20 | - | Anticodon: CAG |
| 955412 | 955495 | - | 84 | 15282445 | aq_t21 | - | Anticodon: TAG |
| 970381 | 970454 | + | 74 | 15282445 | aq_t22 | - | Anticodon: CAT |
| 972005 | 972094 | + | 90 | 15282445 | aq_t23 | - | Anticodon: CGA |
| 1050475 | 1050547 | + | 73 | 15282445 | aq_t24 | - | Anticodon: GTT |
| 1147765 | 1147837 | - | 73 | 15282445 | aq_t25 | - | Anticodon: TTG |
| 1153498 | 1153844 | - | 347 | 15282445 | aq_s01 | - | tmRNA |
| 1174311 | 1174383 | - | 73 | 15282445 | aq_t26 | - | Anticodon: CGG |
| 1192069 | 1193655 | + | 1587 | 15282445 | aq_r04 | - | 16S ribosomal RNA |
| 1193760 | 1193833 | + | 74 | 15282445 | aq_t27 | - | Anticodon: GAT |
| 1193850 | 1193922 | + | 73 | 15282445 | aq_t28 | - | Anticodon: TGC |
| 1193970 | 1196925 | + | 2956 | 15282445 | aq_r05 | - | 23S ribosomal RNA |
| 1196965 | 1197084 | + | 120 | 15282445 | aq_r06 | - | 5S ribosomal RNA |
| 1197109 | 1197182 | + | 74 | 15282445 | aq_t29 | - | Anticodon: TCT |
| 1231223 | 1231312 | - | 90 | 15282445 | aq_t30 | - | Anticodon: TGA |
| 1242836 | 1242908 | - | 73 | 15282445 | aq_t31 | - | Anticodon: CTT |
| 1242937 | 1243010 | - | 74 | 15282445 | aq_t32 | - | Anticodon: ACG |
| 1245134 | 1245206 | + | 73 | 15282445 | aq_t33 | - | Anticodon: GTG |
| 1356480 | 1356552 | + | 73 | 15282445 | aq_t34 | - | Anticodon: TGT |
| 1356575 | 1356659 | + | 85 | 15282445 | aq_t35 | - | Anticodon: GTA |
| 1356669 | 1356741 | + | 73 | 15282445 | aq_t36 | - | Anticodon: TCC |
| 1356774 | 1356846 | + | 73 | 15282445 | aq_t37 | - | Anticodon: GGT |
| 1358326 | 1358398 | + | 73 | 15282445 | aq_t38 | - | Anticodon: CCA |
| 1376005 | 1376079 | - | 75 | 15282445 | aq_t39 | - | Anticodon: GTC |
| 1452941 | 1453013 | - | 73 | 15282445 | aq_t40 | - | Anticodon: TAC |
| 1453038 | 1453112 | - | 75 | 15282445 | aq_t41 | - | Anticodon: TTC |
| 1515350 | 1515422 | - | 73 | 15282445 | aq_t42 | - | Anticodon: TTT |
| 1515439 | 1515511 | - | 73 | 15282445 | aq_t43 | - | Anticodon: GGC |
| 1531052 | 1531124 | - | 73 | 15282445 | aq_t44 | - | Anticodon: TGG |