Геном прокариот/Материалы:NC 006300

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_006300            2314078 bp    DNA     circular BCT 02-DEC-2005
   DEFINITION  Mannheimia succiniciproducens MBEL55E, complete genome.
   ACCESSION   NC_006300
   VERSION     NC_006300.1  GI:52424055
   KEYWORDS    .
   SOURCE      Mannheimia succiniciproducens MBEL55E
     ORGANISM  Mannheimia succiniciproducens MBEL55E
               Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales;
               Pasteurellaceae; Mannheimia.
   REFERENCE   1  (bases 1 to 2314078)
     AUTHORS   Hong,S.H., Kim,J.S., Lee,S.Y., In,Y.H., Choi,S.S., Rih,J.K.,
               Kim,C.H., Jeong,H., Hur,C.G. and Kim,J.J.
     TITLE     The genome sequence of the capnophilic rumen bacterium Mannheimia
               succiniciproducens
     JOURNAL   (er) Nat. Biotechnol. (2004) In press
      PUBMED   15378067
   REFERENCE   2  (bases 1 to 2314078)
     AUTHORS   .
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (22-SEP-2004) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 2314078)
     AUTHORS   In,Y.H., Chae,S., Lee,G.W., Jun,J.H., Lee,G.Y., Choi,S.S.,
               Kim,J.J., Moon,Y.H., Choi,K.R., Jeong,H., Lee,S.Y., Kim,J.S. and
               Hur,C.-G.
     TITLE     Direct Submission
     JOURNAL   Submitted (22-JAN-2003) Korea Advanced Institute of Science and
               Technology, 373-1 Guseong-dong, Yuseong-gu, Daejeon 305-701,
               Republic of Korea
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AE016827.
               COMPLETENESS: full length.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
129	3152	+	3024	52424055	MS23S-1	-	23S ribosomal RNA
3320	3434	+	115	52424055	MS5S-1	-	5S ribosomal RNA
149534	151076	+	1543	52424055	MS16S-1	-	16S ribosomal RNA
151229	151304	+	76	52424055	MStRNA-Glu-1	-	^{04 Glu tRNA}
151479	154501	+	3023	52424055	MS23S-2	-	23S ribosomal RNA
154669	154783	+	115	52424055	MS5S-2	-	5S ribosomal RNA
293328	293403	-	76	52424055	MStRNA-Asn-1	-	^{07 Asn tRNA}
293406	293481	-	76	52424055	MStRNA-Phe-1	-	^{17 Phe tRNA}
383474	383566	+	93	52424055	MStRNA-Ser-1	-	^{08 Ser tRNA}
383579	383655	+	77	52424055	MStRNA-Arg-1	-	^{11 Arg tRNA}
383760	383836	+	77	52424055	MStRNA-Arg-2	-	^{11 Arg tRNA}
401651	403191	+	1541	52424055	MS16S-2	-	16S ribosomal RNA
403262	403338	+	77	52424055	MStRNA-Ile-1	-	^{14 Ile tRNA}
403412	403487	+	76	52424055	MStRNA-Ala-1	-	^{02 Ala tRNA}
403737	406759	+	3023	52424055	MS23S-3	-	23S ribosomal RNA
406927	407041	+	115	52424055	MS5S-3	-	5S ribosomal RNA
407095	407205	+	111	52424055	MS5S-4	-	5S ribosomal RNA
407224	407300	+	77	52424055	MStRNA-Asp-1	-	^{06 Asp tRNA}
407319	407394	+	76	52424055	MStRNA-Trp-1	-	^{20 Trp tRNA}
453911	453986	-	76	52424055	MStRNA-Val-1	-	^{13 Val tRNA}
454087	454162	-	76	52424055	MStRNA-Val-2	-	^{13 Val tRNA}
454202	454277	-	76	52424055	MStRNA-Val-3	-	^{13 Val tRNA}
454316	454391	-	76	52424055	MStRNA-Val-4	-	^{13 Val tRNA}
456108	456183	+	76	52424055	MStRNA-Ala-2	-	^{02 Ala tRNA}
463814	463903	+	90	52424055	MStRNA-Ser-2	-	^{08 Ser tRNA}
653234	653323	+	90	52424055	MStRNA-Ser-3	-	^{08 Ser tRNA}
673341	673416	+	76	52424055	MStRNA-Lys-1	-	^{10 Lys tRNA}
673448	673523	+	76	52424055	MStRNA-Lys-2	-	^{10 Lys tRNA}
673555	673630	+	76	52424055	MStRNA-Lys-3	-	^{10 Lys tRNA}
679509	679594	-	86	52424055	MStRNA-Leu-1	-	^{15 Leu tRNA}
777581	777656	+	76	52424055	MStRNA-Thr-1	-	^{12 Thr tRNA}
813008	813084	+	77	52424055	MStRNA-Arg-3	-	^{11 Arg tRNA}
813117	813192	+	76	52424055	MStRNA-His-1	-	^{09 His tRNA}
813217	813293	+	77	52424055	MStRNA-Pro-1	-	^{03 Pro tRNA}
813445	814986	+	1542	52424055	MS16S-3	-	16S ribosomal RNA
815138	815213	+	76	52424055	MStRNA-Glu-2	-	^{04 Glu tRNA}
815387	818410	+	3024	52424055	MS23S-4	-	23S ribosomal RNA
818578	818692	+	115	52424055	MS5S-5	-	5S ribosomal RNA
823646	823736	+	91	52424055	MStRNA-Ser-4	-	^{08 Ser tRNA}
934832	934918	-	87	52424055	MStRNA-Leu-2	-	^{15 Leu tRNA}
934937	935012	-	76	52424055	MStRNA-Gly-1	-	^{01 Gly tRNA}
1196975	1197051	+	77	52424055	MStRNA-Val-5	-	^{13 Val tRNA}
1280470	1280555	-	86	52424055	MStRNA-Leu-3	-	^{15 Leu tRNA}
1287065	1287139	-	75	52424055	MStRNA-Gln-1	-	^{05 Gln tRNA}
1287184	1287258	-	75	52424055	MStRNA-Gln-2	-	^{05 Gln tRNA}
1287286	1287370	-	85	52424055	MStRNA-Leu-4	-	^{15 Leu tRNA}
1287375	1287451	-	77	52424055	MStRNA-Met-1	-	^{16 Met tRNA}
1379692	1379767	+	76	52424055	MStRNA-Asn-2	-	^{07 Asn tRNA}
1442524	1442600	-	77	52424055	MStRNA-Met-2	-	^{16 Met tRNA}
1454980	1455056	+	77	52424055	MStRNA-Met-3	-	^{16 Met tRNA}
1503113	1503188	+	76	52424055	MStRNA-Gly-2	-	^{01 Gly tRNA}
1503300	1503375	+	76	52424055	MStRNA-Gly-3	-	^{01 Gly tRNA}
1537928	1538014	-	87	52424055	MStRNA-Leu-5	-	^{15 Leu tRNA}
1565151	1565227	-	77	52424055	MStRNA-Asp-2	-	^{06 Asp tRNA}
1565241	1565317	-	77	52424055	MStRNA-Asp-3	-	^{06 Asp tRNA}
1623480	1623555	+	76	52424055	MStRNA-Gly-4	-	^{01 Gly tRNA}
1623566	1623639	+	74	52424055	MStRNA-Cys-1	-	^{19 Cys tRNA}
1623673	1623759	+	87	52424055	MStRNA-Leu-6	-	^{15 Leu tRNA}
1717334	1717448	-	115	52424055	MS5S-6	-	5S ribosomal RNA
1717616	1720639	-	3024	52424055	MS23S-5	-	23S ribosomal RNA
1720889	1720964	-	76	52424055	MStRNA-Ala-3	-	^{02 Ala tRNA}
1721038	1721114	-	77	52424055	MStRNA-Ile-2	-	^{14 Ile tRNA}
1721185	1722725	-	1541	52424055	MS16S-4	-	16S ribosomal RNA
1752775	1752851	-	77	52424055	MStRNA-Met-4	-	^{16 Met tRNA}
1846799	1846875	+	77	52424055	MStRNA-Pro-2	-	^{03 Pro tRNA}
1846912	1846988	+	77	52424055	MStRNA-Arg-4	-	^{11 Arg tRNA}
1989945	1990019	-	75	52424055	MStRNA-Lys-4	-	^{10 Lys tRNA}
2125841	2125916	-	76	52424055	MStRNA-Thr-2	-	^{12 Thr tRNA}
2125920	2125994	-	75	52424055	MStRNA-Gly-5	-	^{01 Gly tRNA}
2126044	2126128	-	85	52424055	MStRNA-Tyr-1	-	^{18 Tyr tRNA}
2126156	2126231	-	76	52424055	MStRNA-Thr-3	-	^{12 Thr tRNA}
2230227	2230341	-	115	52424055	MS5S-7	-	5S ribosomal RNA
2230509	2233532	-	3024	52424055	MS23S-6	-	23S ribosomal RNA
2233707	2233782	-	76	52424055	MStRNA-Glu-3	-	^{04 Glu tRNA}
2233935	2235477	-	1543	52424055	MS16S-5	-	16S ribosomal RNA
2264383	2264473	-	91	52424055	MStRNA-SeC(p)-1	-	Sec tRNA
2312121	2313661	+	1541	52424055	MS16S-6	-	16S ribosomal RNA
2313732	2313808	+	77	52424055	MStRNA-Ile-3	-	^{14 Ile tRNA}
2313882	2313957	+	76	52424055	MStRNA-Ala-4	-	^{02 Ala tRNA}