Геном прокариот/Материалы:NC 007503

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_007503            2401520 bp    DNA     circular BCT 30-MAR-2006
   DEFINITION  Carboxydothermus hydrogenoformans Z-2901, complete genome.
   ACCESSION   NC_007503
   VERSION     NC_007503.1  GI:78042616
   KEYWORDS    .
   SOURCE      Carboxydothermus hydrogenoformans Z-2901
     ORGANISM  Carboxydothermus hydrogenoformans Z-2901
               Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae;
               Carboxydothermus.
   REFERENCE   1  (bases 1 to 2401520)
     AUTHORS   Wu,M., Ren,Q., Durkin,A.S., Daugherty,S.C., Brinkac,L.M.,
               Dodson,R.J., Madupu,R., Sullivan,S.A., Kolonay,J.F., Nelson,W.C.,
               Tallon,L.J., Jones,K.M., Ulrich,L.E., Gonzalez,J.M., Zhulin,I.B.,
               Robb,F.T. and Eisen,J.A.
     TITLE     Life in Hot Carbon Monoxide: The Complete Genome Sequence of
               Carboxydothermus hydrogenoformans Z-2901
     JOURNAL   (er) PLoS Genet. 1 (5), E65 (2005)
      PUBMED   16311624
   REFERENCE   2  (bases 1 to 2401520)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (23-OCT-2005) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 2401520)
     AUTHORS   Eisen,J.A.
     TITLE     Direct Submission
     JOURNAL   Submitted (05-OCT-2005) The Institute for Genomic Research, 9712
               Medical Center Dr, Rockville, MD 20850, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000141.
               COMPLETENESS: full length.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
258392	258750	+	359	78042616	CHY_ChtmRNA1	-	sRNA
264389	264463	+	75	78042616	CHY_tRNA-Arg-1	-	^{11 Arg tRNA}
278160	278233	+	74	78042616	CHY_tRNA-Gly-1	-	^{01 Gly tRNA}
278245	278320	+	76	78042616	CHY_tRNA-Arg-2	-	^{11 Arg tRNA}
278429	278506	+	78	78042616	CHY_tRNA-His-1	-	^{09 His tRNA}
278524	278598	+	75	78042616	CHY_tRNA-Gln-1	-	^{05 Gln tRNA}
278642	278717	+	76	78042616	CHY_tRNA-Lys-1	-	^{10 Lys tRNA}
278769	278851	+	83	78042616	CHY_tRNA-Leu-1	-	^{15 Leu tRNA}
278866	278940	+	75	78042616	CHY_tRNA-Gly-2	-	^{01 Gly tRNA}
335877	335951	+	75	78042616	CHY_tRNA-Ala-1	-	^{02 Ala tRNA}
400477	400551	+	75	78042616	CHY_tRNA-Met-1	-	^{16 Met tRNA}
400587	400662	+	76	78042616	CHY_tRNA-Glu-1	-	^{04 Glu tRNA}
400664	400739	+	76	78042616	CHY_tRNA-Val-1	-	^{13 Val tRNA}
742181	742254	-	74	78042616	CHY_tRNA-Pseudo-1	-	Xaa tRNA
749909	749983	-	75	78042616	CHY_tRNA-Thr-1	-	^{12 Thr tRNA}
793680	793754	-	75	78042616	CHY_tRNA-Val-2	-	^{13 Val tRNA}
916489	916564	-	76	78042616	CHY_tRNA-Ala-2	-	^{02 Ala tRNA}
1070295	1070391	-	97	78042616	CHY_tRNA-SeC-1	-	Sec tRNA
1079775	1079860	-	86	78042616	CHY_tRNA-Leu-2	-	^{15 Leu tRNA}
1079872	1079946	-	75	78042616	CHY_tRNA-Gln-2	-	^{05 Gln tRNA}
1080010	1080095	-	86	78042616	CHY_tRNA-Tyr-1	-	^{18 Tyr tRNA}
1080134	1080211	-	78	78042616	CHY_tRNA-Pro-1	-	^{03 Pro tRNA}
1110279	1110355	+	77	78042616	CHY_tRNA-Pro-2	-	^{03 Pro tRNA}
1204907	1204982	-	76	78042616	CHY_tRNA-Trp-1	-	^{20 Trp tRNA}
1392676	1392789	-	114	78042616	CHY_Ch5SA	-	5S ribosomal RNA
1392965	1395969	-	3005	78042616	CHY_Ch23SA	-	23S ribosomal RNA
1396246	1397744	-	1499	78042616	CHY_Ch16SA	-	16S ribosomal RNA
1430299	1430373	-	75	78042616	CHY_tRNA-Val-3	-	^{13 Val tRNA}
1455661	1455751	-	91	78042616	CHY_tRNA-Leu-3	-	^{15 Leu tRNA}
1455786	1455860	-	75	78042616	CHY_tRNA-Cys-1	-	^{19 Cys tRNA}
1455876	1455950	-	75	78042616	CHY_tRNA-Gly-3	-	^{01 Gly tRNA}
1455962	1456037	-	76	78042616	CHY_tRNA-Phe-1	-	^{17 Phe tRNA}
1456046	1456122	-	77	78042616	CHY_tRNA-Asp-1	-	^{06 Asp tRNA}
1473019	1473101	+	83	78042616	CHY_tRNA-Leu-4	-	^{15 Leu tRNA}
1484409	1484495	+	87	78042616	CHY_tRNA-Leu-5	-	^{15 Leu tRNA}
1700676	1700752	-	77	78042616	CHY_tRNA-Pro-3	-	^{03 Pro tRNA}
1893703	1893816	-	114	78042616	CHY_Ch5SB	-	5S ribosomal RNA
1893992	1896996	-	3005	78042616	CHY_Ch23SB	-	23S ribosomal RNA
1897349	1898847	-	1499	78042616	CHY_Ch16SB	-	16S ribosomal RNA
2018316	2018429	-	114	78042616	CHY_Ch5SC	-	5S ribosomal RNA
2018476	2021481	-	3006	78042616	CHY_Ch23SC	-	23S ribosomal RNA
2021837	2023336	-	1500	78042616	CHY_Ch16SC	-	16S ribosomal RNA
2090735	2090811	-	77	78042616	CHY_tRNA-Met-2	-	^{16 Met tRNA}
2090823	2090898	-	76	78042616	CHY_tRNA-Thr-2	-	^{12 Thr tRNA}
2090900	2090975	-	76	78042616	CHY_tRNA-Met-3	-	^{16 Met tRNA}
2091037	2091112	-	76	78042616	CHY_tRNA-Thr-3	-	^{12 Thr tRNA}
2108406	2108480	-	75	78042616	CHY_tRNA-Asn-1	-	^{07 Asn tRNA}
2108647	2108721	-	75	78042616	CHY_tRNA-Asn-2	-	^{07 Asn tRNA}
2108733	2108846	-	114	78042616	CHY_Ch5SD	-	5S ribosomal RNA
2108894	2111900	-	3007	78042616	CHY_Ch23SD	-	23S ribosomal RNA
2111953	2112028	-	76	78042616	CHY_tRNA-Ala-3	-	^{02 Ala tRNA}
2112060	2112136	-	77	78042616	CHY_tRNA-Ile-1	-	^{14 Ile tRNA}
2112241	2113740	-	1500	78042616	CHY_Ch16SD	-	16S ribosomal RNA
2336370	2336444	-	75	78042616	CHY_tRNA-Gly-4	-	^{01 Gly tRNA}
2367950	2368024	-	75	78042616	CHY_tRNA-Gly-5	-	^{01 Gly tRNA}
2368029	2368103	-	75	78042616	CHY_tRNA-Glu-2	-	^{04 Glu tRNA}
2368113	2368188	-	76	78042616	CHY_tRNA-Lys-2	-	^{10 Lys tRNA}
2376650	2376743	-	94	78042616	CHY_tRNA-Ser-1	-	^{08 Ser tRNA}
2376830	2376923	-	94	78042616	CHY_tRNA-Ser-2	-	^{08 Ser tRNA}
2377459	2377535	-	77	78042616	CHY_tRNA-Arg-3	-	^{11 Arg tRNA}
2385890	2385966	-	77	78042616	CHY_tRNA-Arg-4	-	^{11 Arg tRNA}
2385982	2386077	-	96	78042616	CHY_tRNA-Ser-3	-	^{08 Ser tRNA}
2386093	2386182	-	90	78042616	CHY_tRNA-Ser-4	-	^{08 Ser tRNA}