Геном прокариот/Материалы:NC 007907

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_007907            5727534 bp    DNA     circular BCT 03-APR-2006
   DEFINITION  Desulfitobacterium hafniense Y51, complete genome.
   ACCESSION   NC_007907
   VERSION     NC_007907.1  GI:89892746
   KEYWORDS    .
   SOURCE      Desulfitobacterium hafniense Y51
     ORGANISM  Desulfitobacterium hafniense Y51
               Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae;
               Desulfitobacterium.
   REFERENCE   1
     AUTHORS   Nonaka,H., Keresztes,G., Shinoda,Y., Ikenaga,Y., Abe,M., Naito,K.,
               Inatomi,K., Furukawa,K., Inui,M. and Yukawa,H.
     TITLE     Complete Genome Sequence of the Dehalorespiring Bacterium
               Desulfitobacterium hafniense Y51 and Comparison with
               Dehalococcoides ethenogenes 195
     JOURNAL   J. Bacteriol. 188 (6), 2262-2274 (2006)
      PUBMED   16513756
   REFERENCE   2  (bases 1 to 5727534)
     AUTHORS   .
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (16-MAR-2006) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 5727534)
     AUTHORS   Nonaka,H., Shinoda,Y., Keresztes,G., Ikenaga,Y., Abe,M., Naito,K.,
               Inatomi,K., Furukawa,K., Inui,M. and Yukawa,H.
     TITLE     Direct Submission
     JOURNAL   Submitted (10-DEC-2004) Hiroshi Nonaka, Research Institute of
               Innovative Technology for the Earth (RITE), Microbiology research
               group; 9-2 Kizugawadai Kizu-cho, Soraku-gun, Kyoto 619-0292, Japan
               (E-mail:nonaka@rite.or.jp, Tel:81-774-75-2308, Fax:81-774-75-2321)
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AP008230.
               COMPLETENESS: full length.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
10747	10835	+	89	89892746	DSY_tRNA1-Ser	-	^{08 Ser tRNA}
11032	11110	+	79	89892746	DSY_tRNA2-Arg	-	^{11 Arg tRNA}
11822	11910	+	89	89892746	DSY_tRNA3-Ser	-	^{08 Ser tRNA}
113585	113674	+	90	89892746	DSY_tRNA4-Ser	-	^{08 Ser tRNA}
237001	238657	+	1657	89892746	DSY_16SrRNA1	-	16S ribosomal RNA
238891	238966	+	76	89892746	DSY_tRNA5-Ala	-	^{02 Ala tRNA}
239257	241759	+	2503	89892746	DSY_23SrRNA1	-	23S ribosomal RNA
242145	242184	+	40	89892746	DSY_5SrRNA1	-	5S ribosomal RNA
261673	261748	+	76	89892746	DSY_tRNA6-Val	-	^{13 Val tRNA}
261755	261830	+	76	89892746	DSY_tRNA7-Asp	-	^{06 Asp tRNA}
261838	261913	+	76	89892746	DSY_tRNA8-Phe	-	^{17 Phe tRNA}
261915	261989	+	75	89892746	DSY_tRNA9-Gly	-	^{01 Gly tRNA}
261997	262070	+	74	89892746	DSY_tRNA10-Cys	-	^{19 Cys tRNA}
262088	262176	+	89	89892746	DSY_tRNA11-Leu	-	^{15 Leu tRNA}
262182	262258	+	77	89892746	DSY_tRNA12-Val	-	^{13 Val tRNA}
328928	330584	+	1657	89892746	DSY_16SrRNA2	-	16S ribosomal RNA
331109	333611	+	2503	89892746	DSY_23SrRNA2	-	23S ribosomal RNA
333997	334036	+	40	89892746	DSY_5SrRNA2	-	5S ribosomal RNA
340556	342212	+	1657	89892746	DSY_16SrRNA3	-	16S ribosomal RNA
342446	342521	+	76	89892746	DSY_tRNA13-Ala	-	^{02 Ala tRNA}
342812	345314	+	2503	89892746	DSY_23SrRNA3	-	23S ribosomal RNA
345701	345740	+	40	89892746	DSY_5SrRNA3	-	5S ribosomal RNA
518902	518985	+	84	89892746	DSY_tRNA14-Tyr	-	^{18 Tyr tRNA}
518994	519068	+	75	89892746	DSY_tRNA15-Met	-	^{16 Met tRNA}
634648	634740	+	93	89892746	DSY_tRNA16-SeC(p)	-	Sec tRNA
966084	966158	+	75	89892746	DSY_tRNA17-Thr	-	^{12 Thr tRNA}
968439	968514	+	76	89892746	DSY_tRNA18-Thr	-	^{12 Thr tRNA}
1536427	1536502	+	76	89892746	DSY_tRNA19-Ala	-	^{02 Ala tRNA}
1553914	1554000	+	87	89892746	DSY_tRNA20-Leu	-	^{15 Leu tRNA}
1722797	1722872	+	76	89892746	DSY_tRNA21-Glu	-	^{04 Glu tRNA}
1722879	1722954	+	76	89892746	DSY_tRNA22-Val	-	^{13 Val tRNA}
1722961	1723036	+	76	89892746	DSY_tRNA23-Asp	-	^{06 Asp tRNA}
1723063	1723146	+	84	89892746	DSY_tRNA24-Tyr	-	^{18 Tyr tRNA}
1723155	1723229	+	75	89892746	DSY_tRNA25-Met	-	^{16 Met tRNA}
1723267	1723341	+	75	89892746	DSY_tRNA26-Gln	-	^{05 Gln tRNA}
1723347	1723422	+	76	89892746	DSY_tRNA27-Lys	-	^{10 Lys tRNA}
1723449	1723523	+	75	89892746	DSY_tRNA28-Gly	-	^{01 Gly tRNA}
1723530	1723606	+	77	89892746	DSY_tRNA29-Arg	-	^{11 Arg tRNA}
1723631	1723706	+	76	89892746	DSY_tRNA30-Thr	-	^{12 Thr tRNA}
1723715	1723799	+	85	89892746	DSY_tRNA31-Leu	-	^{15 Leu tRNA}
1723814	1723904	+	91	89892746	DSY_tRNA32-Ser	-	^{08 Ser tRNA}
1723920	1723994	+	75	89892746	DSY_tRNA33-Asn	-	^{07 Asn tRNA}
1723996	1724072	+	77	89892746	DSY_tRNA34-Met	-	^{16 Met tRNA}
1724078	1724151	+	74	89892746	DSY_tRNA35-Gly	-	^{01 Gly tRNA}
1727991	1728065	+	75	89892746	DSY_tRNA36-Gly	-	^{01 Gly tRNA}
1738457	1740132	+	1676	89892746	DSY_16SrRNA4	-	16S ribosomal RNA
1740368	1740444	+	77	89892746	DSY_tRNA37-Ile	-	^{14 Ile tRNA}
1740551	1740626	+	76	89892746	DSY_tRNA38-Ala	-	^{02 Ala tRNA}
1740916	1743418	+	2503	89892746	DSY_23SrRNA4	-	23S ribosomal RNA
1743803	1743842	+	40	89892746	DSY_5SrRNA4	-	5S ribosomal RNA
1926457	1926533	+	77	89892746	DSY_tRNA39-Pro	-	^{03 Pro tRNA}
2104479	2104552	-	74	89892746	DSY_tRNA40-Lys	-	^{10 Lys tRNA}
2151224	2151299	-	76	89892746	DSY_tRNA41-Glu	-	^{04 Glu tRNA}
2311487	2311526	-	40	89892746	DSY_5SrRNA5	-	5S ribosomal RNA
2311913	2314415	-	2503	89892746	DSY_23SrRNA5	-	23S ribosomal RNA
2314706	2314781	-	76	89892746	DSY_tRNA42-Phe	-	^{17 Phe tRNA}
2315004	2316654	-	1651	89892746	DSY_16SrRNA5	-	16S ribosomal RNA
2317420	2317493	-	74	89892746	DSY_tRNA43-Lys	-	^{10 Lys tRNA}
2317504	2317580	-	77	89892746	DSY_tRNA44-Ala	-	^{02 Ala tRNA}
2558605	2558691	-	87	89892746	DSY_tRNA45-Pro	-	^{03 Pro tRNA}
2596713	2596789	-	77	89892746	DSY_tRNA46-Arg	-	^{11 Arg tRNA}
2840903	2840942	-	40	89892746	DSY_5SrRNA6	-	5S ribosomal RNA
2841328	2843831	-	2504	89892746	DSY_23SrRNA6	-	23S ribosomal RNA
2844367	2846045	-	1679	89892746	DSY_16SrRNA6	-	16S ribosomal RNA
3445537	3445612	-	76	89892746	DSY_tRNA47-His	-	^{09 His tRNA}
3445659	3445733	-	75	89892746	DSY_tRNA48-Leu	-	^{15 Leu tRNA}
3445744	3445818	-	75	89892746	DSY_tRNA49-SeC(p)	-	Sec tRNA
3504081	3504173	-	93	89892746	DSY_tRNA50-Asn	-	^{07 Asn tRNA}
3632327	3632409	+	83	89892746	DSY_tRNA51-Trp	-	^{20 Trp tRNA}
3646831	3646906	-	76	89892746	DSY_tRNA52-Met	-	^{16 Met tRNA}
3646922	3646998	-	77	89892746	DSY_tRNA53-Glu	-	^{04 Glu tRNA}
3647051	3647127	-	77	89892746	DSY_tRNA54-Pro	-	^{03 Pro tRNA}
4795797	4795877	-	81	89892746	DSY_tRNA55-Leu	-	^{15 Leu tRNA}
4836859	4836934	-	76	89892746	DSY_tRNA56-Arg	-	^{11 Arg tRNA}
5693442	5693517	-	76	89892746	DSY_tRNA57-Gly	-	^{01 Gly tRNA}
5693523	5693598	-	76	89892746	DSY_tRNA58-Ala	-	^{02 Ala tRNA}
5698784	5698859	-	76	89892746	DSY_tRNA59-Arg	-	^{11 Arg tRNA}