Геном прокариот/Материалы:NC 008769
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Базовый уровень статей |
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LOCUS NC_008769 4374522 bp DNA circular BCT 03-APR-2007
DEFINITION Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome.
ACCESSION NC_008769
VERSION NC_008769.1 GI:121635883
KEYWORDS complete genome.
SOURCE Mycobacterium bovis BCG str. Pasteur 1173P2
ORGANISM Mycobacterium bovis BCG str. Pasteur 1173P2
Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
Corynebacterineae; Mycobacteriaceae; Mycobacterium; Mycobacterium
tuberculosis complex.
REFERENCE 1 (bases 1 to 4374522)
AUTHORS Brosch,R., Gordon,S.V., Garnier,T., Eiglmeier,K., Frigui,W.,
Valenti,P., Dos Santos,S., Duthoy,S., Lacroix,C., Garcia-Pelayo,C.,
Inwald,J.K., Golby,P., Garcia,J.N., Hewinson,R.G., Behr,M.A.,
Quail,M.A., Churcher,C., Barrell,B.G., Parkhill,J. and Cole,S.T.
TITLE Genome plasticity of BCG and impact on vaccine efficacy
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 104 (13), 5596-5601 (2007)
PUBMED 17372194
REFERENCE 2 (bases 1 to 4374522)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (10-JAN-2007) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 4374522)
AUTHORS Garnier,T.
TITLE Direct Submission
JOURNAL Submitted (23-OCT-2006) Garnier T., Unite Genetique Moleculaire
Bacterienne, Institut Pasteur, 28,rue du Dr ROUX, PARIS, 75015,
FRANCE. Garnier T., submitted on behalf of the Mycobacterium bovis
sequencing teams, TB Research Group, Veterinary Laboratories Agency
Weybridge, Woodham Lane, New Haw,Addlestone, Surrey KT15 3NB, UK.
Sanger Centre, Wellcome Trust Genome Campus, Hinxton,Cambridge CB10
1SA, UK. PT4 Annotation, Genopole, Institut Pasteur, 28 Rue du
Docteur Roux, 75724 Paris Cedex 15, France. Unite de Genetique
Moleculaire Bacterienne, Institut Pasteur, 28 rue du Docteur Roux,
75724 Paris Cedex 15, France
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AM408590.
COMPLETENESS: full length.
Расположение РНК
[править]| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 10887 | 10960 | + | 74 | 121635883 | ileT_1 | - | Anticodon: GAT |
| 11112 | 11184 | + | 73 | 121635883 | alaT_1 | - | Anticodon: TGC |
| 40554 | 40627 | + | 74 | 121635883 | ileT_2 | - | Anticodon: GAT |
| 40779 | 40851 | + | 73 | 121635883 | alaT_2 | - | Anticodon: TGC |
| 55292 | 55374 | + | 83 | 121635883 | leuT | - | Anticodon: CAG |
| 417131 | 417201 | - | 71 | 121635883 | glyU | - | Anticodon: CCC |
| 689000 | 689080 | + | 81 | 121635883 | tyrT | - | Anticodon: GTA |
| 762370 | 762442 | + | 73 | 121635883 | thrT | - | Anticodon: GGT |
| 762479 | 762552 | + | 74 | 121635883 | metT | - | Anticodon: CAT |
| 764400 | 764472 | + | 73 | 121635883 | trpT | - | Anticodon: CCA |
| 882425 | 882496 | - | 72 | 121635883 | thrV | - | Anticodon: TGT |
| 954224 | 954296 | - | 73 | 121635883 | lysT | - | Anticodon: TTT |
| 954420 | 954493 | + | 74 | 121635883 | gluT | - | Anticodon: TTC |
| 954531 | 954604 | + | 74 | 121635883 | aspT | - | Anticodon: GTC |
| 954634 | 954707 | + | 74 | 121635883 | pheU | - | Anticodon: GAA |
| 1055796 | 1055868 | - | 73 | 121635883 | argT | - | Anticodon: CCT |
| 1144000 | 1144072 | + | 73 | 121635883 | alaV | - | Anticodon: CGC |
| 1168561 | 1168632 | - | 72 | 121635883 | glnT | - | Anticodon: TTG |
| 1207882 | 1207955 | + | 74 | 121635883 | leuX | - | Anticodon: TAA |
| 1472720 | 1472792 | - | 73 | 121635883 | argV | - | Anticodon: CCG |
| 1498360 | 1499896 | + | 1537 | 121635883 | rrs | - | 16S ribosomal RNA |
| 1500172 | 1503309 | + | 3138 | 121635883 | rrl | - | 23S ribosomal RNA |
| 1503413 | 1503527 | + | 115 | 121635883 | rrf | - | 5S ribosomal RNA |
| 1539242 | 1539325 | + | 84 | 121635883 | leuW | - | Anticodon: TAG |
| 1833262 | 1833335 | - | 74 | 121635883 | leuV | - | Anticodon: CAA |
| 1951829 | 1951902 | + | 74 | 121635883 | proT | - | Anticodon: GGG |
| 2381997 | 2382082 | + | 86 | 121635883 | leuU | - | Anticodon: GAG |
| 2479089 | 2479395 | - | 307 | 121635883 | rnpB | - | ribonuclease P RNA |
| 2489243 | 2489314 | - | 72 | 121635883 | valV | - | Anticodon: TAC |
| 2558859 | 2558932 | - | 74 | 121635883 | metV | - | Anticodon: CAT |
| 2596504 | 2596576 | - | 73 | 121635883 | asnT | - | Anticodon: GTT |
| 2730501 | 2730574 | - | 74 | 121635883 | proU | - | Anticodon: TGG |
| 2730711 | 2730781 | + | 71 | 121635883 | glyV | - | Anticodon: TCC |
| 2757985 | 2758058 | + | 74 | 121635883 | argW | - | Anticodon: TCT |
| 2791650 | 2791722 | + | 73 | 121635883 | hisT | - | Anticodon: GTG |
| 2799290 | 2799362 | + | 73 | 121635883 | lysU | - | Anticodon: CTT |
| 2934007 | 2934078 | - | 72 | 121635883 | valT | - | Anticodon: CAC |
| 2934263 | 2934335 | + | 73 | 121635883 | glyT | - | Anticodon: GCC |
| 2934365 | 2934435 | + | 71 | 121635883 | cysU | - | Anticodon: GCA |
| 2934452 | 2934523 | + | 72 | 121635883 | valU | - | Anticodon: GAC |
| 3303034 | 3303106 | - | 73 | 121635883 | gluU | - | Anticodon: CTC |
| 3303146 | 3303217 | - | 72 | 121635883 | glnU | - | Anticodon: CTG |
| 3386326 | 3386398 | - | 73 | 121635883 | alaU | - | Anticodon: GGC |
| 3422299 | 3422905 | - | 607 | 121635883 | ssr | - | 10Sa RNA |
| 3511842 | 3511915 | - | 74 | 121635883 | metU | - | Anticodon: CAT |
| 4054386 | 4054458 | - | 73 | 121635883 | thrU | - | Anticodon: CGT |
| 4099654 | 4099727 | + | 74 | 121635883 | proY | - | Anticodon: CGG |
| 4141913 | 4141998 | + | 86 | 121635883 | serV | - | Anticodon: GGA |
| 4171533 | 4171619 | - | 87 | 121635883 | serX | - | Anticodon: CGA |
| 4189267 | 4189339 | - | 73 | 121635883 | argU | - | Anticodon: ACG |
| 4189370 | 4189458 | - | 89 | 121635883 | serT | - | Anticodon: GCT |
| 4194984 | 4195070 | - | 87 | 121635883 | serU | - | Anticodon: TGA |