Геном прокариот/Материалы:NC 009142
 |
Базовый уровень статей |
 |
LOCUS NC_009142 8212805 bp DNA circular BCT 09-AUG-2007
DEFINITION Saccharopolyspora erythraea NRRL 2338, complete genome.
ACCESSION NC_009142
VERSION NC_009142.1 GI:134096620
KEYWORDS complete genome.
SOURCE Saccharopolyspora erythraea NRRL 2338
ORGANISM Saccharopolyspora erythraea NRRL 2338
Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales;
Pseudonocardineae; Pseudonocardiaceae; Saccharopolyspora.
REFERENCE 1 (bases 1 to 8212805)
AUTHORS Oliynyk,M., Samborskyy,M., Lester,J.B., Mironenko,T., Scott,N.,
Dickens,S., Haydock,S.F. and Leadlay,P.F.
TITLE Complete genome sequence of the erythromycin-producing bacterium
Saccharopolyspora erythraea NRRL23338
JOURNAL Nat. Biotechnol. 25 (4), 447-453 (2007)
PUBMED 17369815
REFERENCE 2 (bases 1 to 8212805)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (23-MAR-2007) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 8212805)
AUTHORS Oliynyk,M.
TITLE Direct Submission
JOURNAL Submitted (10-NOV-2006) Oliynyk M., Department of Biochemistry,
University of Cambridge, 80 Tennis Court Road, Cambridge, CB21GA,
UNITED KINGDOM
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AM420293.
Project: 18489.
COMPLETENESS: full length.
Расположение РНК
[править]| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 14011 | 14087 | + | 77 | 134096620 | SACE_8001 | - | 06 Asp tRNA |
| 14402 | 14474 | + | 73 | 134096620 | SACE_8002 | - | 19 Cys tRNA |
| 69093 | 69175 | + | 83 | 134096620 | SACE_8003 | - | 05 Gln tRNA |
| 139007 | 139079 | - | 73 | 134096620 | SACE_8004 | - | 02 Ala tRNA |
| 245758 | 245845 | + | 88 | 134096620 | SACE_8005 | - | Xaa tRNA |
| 257748 | 257837 | + | 90 | 134096620 | SACE_8006 | - | 02 Ala tRNA |
| 257877 | 257949 | + | 73 | 134096620 | SACE_8007 | - | 12 Thr tRNA |
| 269855 | 269943 | + | 89 | 134096620 | SACE_8008 | - | 11 Arg tRNA |
| 273542 | 273627 | + | 86 | 134096620 | SACE_8009 | - | 01 Gly tRNA |
| 347498 | 347574 | - | 77 | 134096620 | SACE_8010 | - | 11 Arg tRNA |
| 425592 | 425665 | + | 74 | 134096620 | SACE_8011 | - | 11 Arg tRNA |
| 519360 | 519435 | + | 76 | 134096620 | SACE_8012 | - | 19 Cys tRNA |
| 842817 | 842892 | - | 76 | 134096620 | SACE_8013 | - | 03 Pro tRNA |
| 868326 | 868398 | + | 73 | 134096620 | SACE_8014 | - | 11 Arg tRNA |
| 915413 | 915486 | - | 74 | 134096620 | SACE_8015 | - | 15 Leu tRNA |
| 958353 | 958426 | + | 74 | 134096620 | SACE_8016 | - | 15 Leu tRNA |
| 1226388 | 1226464 | + | 77 | 134096620 | SACE_8017 | - | 09 His tRNA |
| 1226781 | 1226854 | + | 74 | 134096620 | SACE_8018 | - | 09 His tRNA |
| 1245915 | 1245990 | + | 76 | 134096620 | SACE_8019 | - | 01 Gly tRNA |
| 1376200 | 1376276 | - | 77 | 134096620 | SACE_8020 | - | 15 Leu tRNA |
| 1402739 | 1404280 | + | 1542 | 134096620 | SACE_8101 | - | 16S ribosomal RNA |
| 1404506 | 1407582 | + | 3077 | 134096620 | SACE_8103 | - | 23S ribosomal RNA |
| 1407707 | 1407827 | + | 121 | 134096620 | SACE_8104 | - | 5S ribosomal RNA |
| 1423961 | 1424033 | - | 73 | 134096620 | SACE_8021 | - | 15 Leu tRNA |
| 1425561 | 1425636 | - | 76 | 134096620 | SACE_8022 | - | 13 Val tRNA |
| 1456109 | 1456182 | - | 74 | 134096620 | SACE_8023 | - | 08 Ser tRNA |
| 1504201 | 1504274 | - | 74 | 134096620 | SACE_8024 | - | 08 Ser tRNA |
| 1504447 | 1504523 | + | 77 | 134096620 | SACE_8025 | - | 20 Trp tRNA |
| 1657746 | 1657818 | + | 73 | 134096620 | SACE_8026 | - | 13 Val tRNA |
| 1660112 | 1660189 | - | 78 | 134096620 | SACE_8027 | - | 09 His tRNA |
| 1684451 | 1684525 | + | 75 | 134096620 | SACE_8028 | - | 18 Tyr tRNA |
| 1777032 | 1778573 | + | 1542 | 134096620 | SACE_8105 | - | 16S ribosomal RNA |
| 1778799 | 1781875 | + | 3077 | 134096620 | SACE_8107 | - | 23S ribosomal RNA |
| 1782000 | 1782120 | + | 121 | 134096620 | SACE_8108 | - | 5S ribosomal RNA |
| 2140360 | 2140431 | - | 72 | 134096620 | SACE_8029 | - | 09 His tRNA |
| 2142378 | 2142450 | + | 73 | 134096620 | SACE_8030 | - | 02 Ala tRNA |
| 2142496 | 2142567 | + | 72 | 134096620 | SACE_8031 | - | 02 Ala tRNA |
| 2142569 | 2142643 | + | 75 | 134096620 | SACE_8032 | - | 06 Asp tRNA |
| 2486667 | 2486752 | + | 86 | 134096620 | SACE_8033 | - | 04 Glu tRNA |
| 3920251 | 3920342 | - | 92 | 134096620 | SACE_8034 | - | 08 Ser tRNA |
| 5740090 | 5740163 | - | 74 | 134096620 | SACE_8035 | - | 01 Gly tRNA |
| 5876599 | 5876719 | - | 121 | 134096620 | SACE_8109 | - | 5S ribosomal RNA |
| 5876845 | 5879921 | - | 3077 | 134096620 | SACE_8110 | - | 23S ribosomal RNA |
| 5880147 | 5881689 | - | 1543 | 134096620 | SACE_8112 | - | 16S ribosomal RNA |
| 6084936 | 6085008 | + | 73 | 134096620 | SACE_8036 | - | 05 Gln tRNA |
| 6891483 | 6891555 | - | 73 | 134096620 | SACE_8037 | - | 15 Leu tRNA |
| 6892252 | 6892324 | - | 73 | 134096620 | SACE_8038 | - | 15 Leu tRNA |
| 6892376 | 6892450 | - | 75 | 134096620 | SACE_8039 | - | 15 Leu tRNA |
| 7057549 | 7057621 | + | 73 | 134096620 | SACE_8040 | - | 03 Pro tRNA |
| 7214529 | 7214649 | - | 121 | 134096620 | SACE_8113 | - | 5S ribosomal RNA |
| 7214775 | 7217851 | - | 3077 | 134096620 | SACE_8114 | - | 23S ribosomal RNA |
| 7218077 | 7219618 | - | 1542 | 134096620 | SACE_8116 | - | 16S ribosomal RNA |
| 7429290 | 7429364 | - | 75 | 134096620 | SACE_8041 | - | 06 Asp tRNA |
| 7687828 | 7687900 | - | 73 | 134096620 | SACE_8042 | - | 03 Pro tRNA |
| 7691101 | 7691176 | - | 76 | 134096620 | SACE_8043 | - | 09 His tRNA |
| 7691250 | 7691322 | - | 73 | 134096620 | SACE_8044 | - | 01 Gly tRNA |
| 7696511 | 7696591 | - | 81 | 134096620 | SACE_8045 | - | 13 Val tRNA |
| 7840504 | 7840580 | - | 77 | 134096620 | SACE_8046 | - | 04 Glu tRNA |
| 7840611 | 7840687 | - | 77 | 134096620 | SACE_8047 | - | 13 Val tRNA |
| 7840704 | 7840776 | - | 73 | 134096620 | SACE_8048 | - | 17 Phe tRNA |
| 7890165 | 7890240 | - | 76 | 134096620 | SACE_8049 | - | 17 Phe tRNA |
| 8031417 | 8031490 | + | 74 | 134096620 | SACE_8050 | - | 03 Pro tRNA |