Геном прокариот/Материалы:NC 009488

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Эта статья — часть материалов: лаборатории Биоинформатика, исследовательского проекта «Геном прокариот»

   LOCUS       NC_009488            2127051 bp    DNA     linear   BCT 02-JUL-2007
   DEFINITION  Orientia tsutsugamushi Boryong, complete genome.
   ACCESSION   NC_009488
   VERSION     NC_009488.1  GI:148283997
   KEYWORDS    complete genome.
   SOURCE      Orientia tsutsugamushi Boryong
     ORGANISM  Orientia tsutsugamushi Boryong
               Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales;
               Rickettsiaceae; Rickettsieae; Orientia.
   REFERENCE   1
     AUTHORS   Cho,N.H., Kim,H.R., Lee,J.H., Kim,S.Y., Kim,J., Cha,S., Kim,S.Y.,
               Darby,A.C., Fuxelius,H.H., Yin,J., Kim,J.H., Kim,J., Lee,S.J.,
               Koh,Y.S., Jang,W.J., Park,K.H., Andersson,S.G., Choi,M.S. and
               Kim,I.S.
     TITLE     The Orientia tsutsugamushi genome reveals massive proliferation of
               conjugative type IV secretion system and host-cell interaction
               genes
     JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 104 (19), 7981-7986 (2007)
      PUBMED   17483455
   REFERENCE   2  (bases 1 to 2127051)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (04-JUN-2007) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 2127051)
     AUTHORS   Cho,N.H.
     TITLE     Direct Submission
     JOURNAL   Submitted (21-FEB-2007) Cho N.H., Department of Microbiology and
               Immunolgy, Seoul National University Coll. Med., 28 Yongon-Dong
               Chongno-Gu, Seoul, 110-799, SOUTH KOREA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AM494475.
               The genome is under annotation process.
               COMPLETENESS: full length.

Расположение РНК

Начало	Конец	Направление	Длина	PID	Ген	COG	Комментарий
116907	116981	+	75	148283997	OTBS_t32	-	^{12 Thr tRNA}
135694	135770	+	77	148283997	OTBS_t06	-	^{11 Arg tRNA}
149380	149454	-	75	148283997	OTBS_t12	-	^{05 Gln tRNA}
185253	185327	-	75	148283997	OTBS_t24	-	^{16 Met tRNA}
205233	205307	-	75	148283997	OTBS_t35	-	^{20 Trp tRNA}
210495	210570	+	76	148283997	OTBS_t22	-	^{10 Lys tRNA}
242226	242300	+	75	148283997	OTBS_t09	-	^{07 Asn tRNA}
327170	327258	+	89	148283997	OTBS_t29	-	^{08 Ser tRNA}
334139	334255	-	117	148283997	OTBS_r03	-	5S ribosomal RNA
334389	337206	-	2818	148283997	OTBS_r02	-	23S ribosomal RNA
361540	361613	-	74	148283997	OTBS_t14	-	^{01 Gly tRNA}
361632	361717	-	86	148283997	OTBS_t36	-	^{18 Tyr tRNA}
381146	381220	+	75	148283997	OTBS_t11	-	^{19 Cys tRNA}
415857	415933	-	77	148283997	OTBS_t16	-	^{09 His tRNA}
447829	447918	+	90	148283997	OTBS_t18	-	^{15 Leu tRNA}
506927	507002	-	76	148283997	OTBS_t37	-	^{13 Val tRNA}
507102	507176	-	75	148283997	OTBS_t15	-	^{01 Gly tRNA}
525455	525539	-	85	148283997	OTBS_t21	-	^{15 Leu tRNA}
535633	535707	-	75	148283997	OTBS_t34	-	^{12 Thr tRNA}
639439	639516	-	78	148283997	OTBS_t10	-	^{06 Asp tRNA}
823507	823583	-	77	148283997	OTBS_t25	-	^{16 Met tRNA}
1025864	1025940	-	77	148283997	OTBS_t07	-	^{11 Arg tRNA}
1090386	1090476	-	91	148283997	OTBS_t30	-	^{08 Ser tRNA}
1111946	1112022	-	77	148283997	OTBS_t17	-	^{14 Ile tRNA}
1234813	1234887	+	75	148283997	OTBS_t27	-	^{17 Phe tRNA}
1273344	1273419	+	76	148283997	OTBS_t33	-	^{12 Thr tRNA}
1322598	1324120	+	1523	148283997	OTBS_r01	-	16S ribosomal RNA
1377106	1377182	-	77	148283997	OTBS_t38	-	^{13 Val tRNA}
1383217	1383291	+	75	148283997	OTBS_t13	-	^{04 Glu tRNA}
1574590	1574675	+	86	148283997	OTBS_t19	-	^{15 Leu tRNA}
1595286	1595362	+	77	148283997	OTBS_t23	-	^{16 Met tRNA}
1640004	1640080	-	77	148283997	OTBS_t08	-	^{11 Arg tRNA}
1802954	1803046	-	93	148283997	OTBS_t31	-	^{08 Ser tRNA}
1856192	1856267	+	76	148283997	OTBS_t04	-	^{02 Ala tRNA}
1975168	1975253	+	86	148283997	OTBS_t20	-	^{15 Leu tRNA}
2064457	2064533	+	77	148283997	OTBS_t28	-	^{03 Pro tRNA}
2123749	2123823	-	75	148283997	OTBS_t05	-	^{02 Ala tRNA}