Геном прокариот/Материалы:NC 007907
(перенаправлено с «Материалы:NC 007907»)
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Базовый уровень статей |
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LOCUS NC_007907 5727534 bp DNA circular BCT 03-APR-2006
DEFINITION Desulfitobacterium hafniense Y51, complete genome.
ACCESSION NC_007907
VERSION NC_007907.1 GI:89892746
KEYWORDS .
SOURCE Desulfitobacterium hafniense Y51
ORGANISM Desulfitobacterium hafniense Y51
Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae;
Desulfitobacterium.
REFERENCE 1
AUTHORS Nonaka,H., Keresztes,G., Shinoda,Y., Ikenaga,Y., Abe,M., Naito,K.,
Inatomi,K., Furukawa,K., Inui,M. and Yukawa,H.
TITLE Complete Genome Sequence of the Dehalorespiring Bacterium
Desulfitobacterium hafniense Y51 and Comparison with
Dehalococcoides ethenogenes 195
JOURNAL J. Bacteriol. 188 (6), 2262-2274 (2006)
PUBMED 16513756
REFERENCE 2 (bases 1 to 5727534)
AUTHORS .
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (16-MAR-2006) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 5727534)
AUTHORS Nonaka,H., Shinoda,Y., Keresztes,G., Ikenaga,Y., Abe,M., Naito,K.,
Inatomi,K., Furukawa,K., Inui,M. and Yukawa,H.
TITLE Direct Submission
JOURNAL Submitted (10-DEC-2004) Hiroshi Nonaka, Research Institute of
Innovative Technology for the Earth (RITE), Microbiology research
group; 9-2 Kizugawadai Kizu-cho, Soraku-gun, Kyoto 619-0292, Japan
(E-mail:nonaka@rite.or.jp, Tel:81-774-75-2308, Fax:81-774-75-2321)
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AP008230.
COMPLETENESS: full length.
Расположение РНК
[править]| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 10747 | 10835 | + | 89 | 89892746 | DSY_tRNA1-Ser | - | 08 Ser tRNA |
| 11032 | 11110 | + | 79 | 89892746 | DSY_tRNA2-Arg | - | 11 Arg tRNA |
| 11822 | 11910 | + | 89 | 89892746 | DSY_tRNA3-Ser | - | 08 Ser tRNA |
| 113585 | 113674 | + | 90 | 89892746 | DSY_tRNA4-Ser | - | 08 Ser tRNA |
| 237001 | 238657 | + | 1657 | 89892746 | DSY_16SrRNA1 | - | 16S ribosomal RNA |
| 238891 | 238966 | + | 76 | 89892746 | DSY_tRNA5-Ala | - | 02 Ala tRNA |
| 239257 | 241759 | + | 2503 | 89892746 | DSY_23SrRNA1 | - | 23S ribosomal RNA |
| 242145 | 242184 | + | 40 | 89892746 | DSY_5SrRNA1 | - | 5S ribosomal RNA |
| 261673 | 261748 | + | 76 | 89892746 | DSY_tRNA6-Val | - | 13 Val tRNA |
| 261755 | 261830 | + | 76 | 89892746 | DSY_tRNA7-Asp | - | 06 Asp tRNA |
| 261838 | 261913 | + | 76 | 89892746 | DSY_tRNA8-Phe | - | 17 Phe tRNA |
| 261915 | 261989 | + | 75 | 89892746 | DSY_tRNA9-Gly | - | 01 Gly tRNA |
| 261997 | 262070 | + | 74 | 89892746 | DSY_tRNA10-Cys | - | 19 Cys tRNA |
| 262088 | 262176 | + | 89 | 89892746 | DSY_tRNA11-Leu | - | 15 Leu tRNA |
| 262182 | 262258 | + | 77 | 89892746 | DSY_tRNA12-Val | - | 13 Val tRNA |
| 328928 | 330584 | + | 1657 | 89892746 | DSY_16SrRNA2 | - | 16S ribosomal RNA |
| 331109 | 333611 | + | 2503 | 89892746 | DSY_23SrRNA2 | - | 23S ribosomal RNA |
| 333997 | 334036 | + | 40 | 89892746 | DSY_5SrRNA2 | - | 5S ribosomal RNA |
| 340556 | 342212 | + | 1657 | 89892746 | DSY_16SrRNA3 | - | 16S ribosomal RNA |
| 342446 | 342521 | + | 76 | 89892746 | DSY_tRNA13-Ala | - | 02 Ala tRNA |
| 342812 | 345314 | + | 2503 | 89892746 | DSY_23SrRNA3 | - | 23S ribosomal RNA |
| 345701 | 345740 | + | 40 | 89892746 | DSY_5SrRNA3 | - | 5S ribosomal RNA |
| 518902 | 518985 | + | 84 | 89892746 | DSY_tRNA14-Tyr | - | 18 Tyr tRNA |
| 518994 | 519068 | + | 75 | 89892746 | DSY_tRNA15-Met | - | 16 Met tRNA |
| 634648 | 634740 | + | 93 | 89892746 | DSY_tRNA16-SeC(p) | - | Sec tRNA |
| 966084 | 966158 | + | 75 | 89892746 | DSY_tRNA17-Thr | - | 12 Thr tRNA |
| 968439 | 968514 | + | 76 | 89892746 | DSY_tRNA18-Thr | - | 12 Thr tRNA |
| 1536427 | 1536502 | + | 76 | 89892746 | DSY_tRNA19-Ala | - | 02 Ala tRNA |
| 1553914 | 1554000 | + | 87 | 89892746 | DSY_tRNA20-Leu | - | 15 Leu tRNA |
| 1722797 | 1722872 | + | 76 | 89892746 | DSY_tRNA21-Glu | - | 04 Glu tRNA |
| 1722879 | 1722954 | + | 76 | 89892746 | DSY_tRNA22-Val | - | 13 Val tRNA |
| 1722961 | 1723036 | + | 76 | 89892746 | DSY_tRNA23-Asp | - | 06 Asp tRNA |
| 1723063 | 1723146 | + | 84 | 89892746 | DSY_tRNA24-Tyr | - | 18 Tyr tRNA |
| 1723155 | 1723229 | + | 75 | 89892746 | DSY_tRNA25-Met | - | 16 Met tRNA |
| 1723267 | 1723341 | + | 75 | 89892746 | DSY_tRNA26-Gln | - | 05 Gln tRNA |
| 1723347 | 1723422 | + | 76 | 89892746 | DSY_tRNA27-Lys | - | 10 Lys tRNA |
| 1723449 | 1723523 | + | 75 | 89892746 | DSY_tRNA28-Gly | - | 01 Gly tRNA |
| 1723530 | 1723606 | + | 77 | 89892746 | DSY_tRNA29-Arg | - | 11 Arg tRNA |
| 1723631 | 1723706 | + | 76 | 89892746 | DSY_tRNA30-Thr | - | 12 Thr tRNA |
| 1723715 | 1723799 | + | 85 | 89892746 | DSY_tRNA31-Leu | - | 15 Leu tRNA |
| 1723814 | 1723904 | + | 91 | 89892746 | DSY_tRNA32-Ser | - | 08 Ser tRNA |
| 1723920 | 1723994 | + | 75 | 89892746 | DSY_tRNA33-Asn | - | 07 Asn tRNA |
| 1723996 | 1724072 | + | 77 | 89892746 | DSY_tRNA34-Met | - | 16 Met tRNA |
| 1724078 | 1724151 | + | 74 | 89892746 | DSY_tRNA35-Gly | - | 01 Gly tRNA |
| 1727991 | 1728065 | + | 75 | 89892746 | DSY_tRNA36-Gly | - | 01 Gly tRNA |
| 1738457 | 1740132 | + | 1676 | 89892746 | DSY_16SrRNA4 | - | 16S ribosomal RNA |
| 1740368 | 1740444 | + | 77 | 89892746 | DSY_tRNA37-Ile | - | 14 Ile tRNA |
| 1740551 | 1740626 | + | 76 | 89892746 | DSY_tRNA38-Ala | - | 02 Ala tRNA |
| 1740916 | 1743418 | + | 2503 | 89892746 | DSY_23SrRNA4 | - | 23S ribosomal RNA |
| 1743803 | 1743842 | + | 40 | 89892746 | DSY_5SrRNA4 | - | 5S ribosomal RNA |
| 1926457 | 1926533 | + | 77 | 89892746 | DSY_tRNA39-Pro | - | 03 Pro tRNA |
| 2104479 | 2104552 | - | 74 | 89892746 | DSY_tRNA40-Lys | - | 10 Lys tRNA |
| 2151224 | 2151299 | - | 76 | 89892746 | DSY_tRNA41-Glu | - | 04 Glu tRNA |
| 2311487 | 2311526 | - | 40 | 89892746 | DSY_5SrRNA5 | - | 5S ribosomal RNA |
| 2311913 | 2314415 | - | 2503 | 89892746 | DSY_23SrRNA5 | - | 23S ribosomal RNA |
| 2314706 | 2314781 | - | 76 | 89892746 | DSY_tRNA42-Phe | - | 17 Phe tRNA |
| 2315004 | 2316654 | - | 1651 | 89892746 | DSY_16SrRNA5 | - | 16S ribosomal RNA |
| 2317420 | 2317493 | - | 74 | 89892746 | DSY_tRNA43-Lys | - | 10 Lys tRNA |
| 2317504 | 2317580 | - | 77 | 89892746 | DSY_tRNA44-Ala | - | 02 Ala tRNA |
| 2558605 | 2558691 | - | 87 | 89892746 | DSY_tRNA45-Pro | - | 03 Pro tRNA |
| 2596713 | 2596789 | - | 77 | 89892746 | DSY_tRNA46-Arg | - | 11 Arg tRNA |
| 2840903 | 2840942 | - | 40 | 89892746 | DSY_5SrRNA6 | - | 5S ribosomal RNA |
| 2841328 | 2843831 | - | 2504 | 89892746 | DSY_23SrRNA6 | - | 23S ribosomal RNA |
| 2844367 | 2846045 | - | 1679 | 89892746 | DSY_16SrRNA6 | - | 16S ribosomal RNA |
| 3445537 | 3445612 | - | 76 | 89892746 | DSY_tRNA47-His | - | 09 His tRNA |
| 3445659 | 3445733 | - | 75 | 89892746 | DSY_tRNA48-Leu | - | 15 Leu tRNA |
| 3445744 | 3445818 | - | 75 | 89892746 | DSY_tRNA49-SeC(p) | - | Sec tRNA |
| 3504081 | 3504173 | - | 93 | 89892746 | DSY_tRNA50-Asn | - | 07 Asn tRNA |
| 3632327 | 3632409 | + | 83 | 89892746 | DSY_tRNA51-Trp | - | 20 Trp tRNA |
| 3646831 | 3646906 | - | 76 | 89892746 | DSY_tRNA52-Met | - | 16 Met tRNA |
| 3646922 | 3646998 | - | 77 | 89892746 | DSY_tRNA53-Glu | - | 04 Glu tRNA |
| 3647051 | 3647127 | - | 77 | 89892746 | DSY_tRNA54-Pro | - | 03 Pro tRNA |
| 4795797 | 4795877 | - | 81 | 89892746 | DSY_tRNA55-Leu | - | 15 Leu tRNA |
| 4836859 | 4836934 | - | 76 | 89892746 | DSY_tRNA56-Arg | - | 11 Arg tRNA |
| 5693442 | 5693517 | - | 76 | 89892746 | DSY_tRNA57-Gly | - | 01 Gly tRNA |
| 5693523 | 5693598 | - | 76 | 89892746 | DSY_tRNA58-Ala | - | 02 Ala tRNA |
| 5698784 | 5698859 | - | 76 | 89892746 | DSY_tRNA59-Arg | - | 11 Arg tRNA |